Seed Cluster Table

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missmath polyA/T blast hit
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total hit 40046
Id No 21 to 40 [Previous 20][Next 20]

NoCluster IdContig IdFragmentshomology search resultscoree-valueconsensus lengthover view
20
14
PTA.sd.14.C1
2
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cytochrome P450 SP:O48927 from [Glycine max]30290.01752
21
15
PTA.sd.15.C1
4
At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putative similar to GTP-binding protein GB:D12541 GI:303736 from [Pisum sativum]19450.0983
22
16
PTA.sd.16.C1
6
At1g01210.1 68414.m00035 DNA-directed RNA polymerase III family protein similar to SP|O13896 DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6) {Schizosaccharomyces pombe}; contains Pfam profiles PF02150: RNA polymerases M/15 Kd subunit, PF01096: Transcription factor S-II (TFIIS)12170.0631
23
17
PTA.sd.17.C1
2
At1g01220.1 68414.m00036 GHMP kinase-related contains similarity to L-fucose kinase [Homo sapiens] gi|21212956|emb|CAD2964762640.03849
24
17
PTA.sd.17.C2
3
At1g01225.1 68414.m00037 NC domain-containing protein-related contains weak hit to Pfam profile PF04970: NC domain18770.0983
25
18
PTA.sd.18.C1
10
At1g01230.1 68414.m00038 ORMDL family protein contains Pfam domain PF04061: ORMDL family16080.0829
26
19
PTA.sd.19.C1
11
At1g01240.1 68414.m00039 expressed protein25370.01290
27
20
PTA.sd.20.C1
3
At1g01250.1 68414.m00042 AP2 domain-containing transcription factor, putative similar to transcription factor TINY GB:CAA64359 GI:1246403 from [Arabidopsis thaliana]16140.0833
28
21
PTA.sd.21.C1
9
At1g01260.1 68414.m00043 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain51110.02578
29
21
BT004517.F
1
At1g01260.1 68414.m00043 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain35150.01773
30
22
PTA.sd.22.C1
3
At1g01280.1 68414.m00044 cytochrome P450 family protein similar to cytochrome P450 GB:BAA92894 GI:7339658 from [ Petunia hybrida]30590.01579
31
23
PTA.sd.23.C1
3
At1g01290.1 68414.m00045 molybdopterin biosynthesis CNX3 protein / molybdenum cofactor biosynthesis enzyme CNX3 (CNX3) identical to molybdopterin biosynthesis CNX3 protein SP|Q39056 from [Arabidopsis thaliana]16330.0968
32
24
PTA.sd.24.C1
29
At1g01300.1 68414.m00046 aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease36060.01864
33
24
BT006619.F
1
At1g01300.1 68414.m00046 aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease28900.01458
34
25
PTA.sd.25.C1
16
At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containing protein low similarity to SP|P46825 Kinesin light chain (KLC) {Loligo pealeii}; contains Pfam profile PF00515: TPR Domain62230.03524
35
26
PTA.sd.26.C1
8
At1g01350.1 68414.m00050 zinc finger (CCCH-type/C3HC4-type RING finger) family protein similar to SP|O15541 Zinc finger protein 183 {Homo sapiens}; contains Pfam profiles PF04396: Protein of unknown function, DUF537, PF00097: Zinc finger, C3HC4 type (RING finger), PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)20420.01367
36
27
PTA.sd.27.C1
7
At1g01360.1 68414.m00051 expressed protein similar to hypothetical protein GB:CAB45785 GI:5262156 from [Arabidopsis thaliana]18610.0939
37
27
BT006399.F
1
At1g01360.1 68414.m00051 expressed protein similar to hypothetical protein GB:CAB45785 GI:5262156 from [Arabidopsis thaliana]11180.0564
38
28
PTA.sd.28.C1
2
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) similar to histone H3 GB:X17141 GI:10795 from Tetrahymena pyriformis, GI:161790 from Tetrahymena thermophila; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H417540.0910
39
29
PTA.sd.29.C1
6
At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase33440.01688
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