BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Z47602.f
(313 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g44310.2 68416.m04759 nitrilase 1 (NIT1) identical to SP... 486 e-137
At3g44310.1 68416.m04758 nitrilase 1 (NIT1) identical to SP... 486 e-137
At3g44300.1 68416.m04757 nitrilase 2 (NIT2) identical to SP... 186 7e-47
At3g44320.1 68416.m04760 nitrilase 3 (NIT3) identical to SP... 168 2e-41
At5g22300.1 68418.m02601 nitrilase 4 (NIT4) identical to SP... 36 0.17
>At3g44310.2 68416.m04759 nitrilase 1 (NIT1) identical to SP|P32961 Nitrilase 1
(EC 3.5.5.1) {Arabidopsis thaliana}
Length = 1121
Score = 486 bits (245), Expect = e-137
Identities = 295/313 (94%)
Strand = Plus / Minus
Query: 1 tattacttgactccatagatcttaccattgaagagaaagataaataaacttgaacataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 tattacttgactccatagatcttaccattgaagagaaagataaataaacttgaacataaa 1041
Query: 61 atgaaaacgcaacagaacatgggggngttgactccatacgattgacataattccagcaga 120
|||||||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 1040 atgaaaacgcaacagaacattttggacttgactccatacgattgacataactccagcaga 981
Query: 121 tacgaacttcacgtntcttantattggggggagtcatcctcagntttctccaccttcgtc 180
||||||||||| || ||||| |||| | ||||||||||||| ||||||||||||||||
Sbjct: 980 tacgaacttcaagtctcttactatttgtttgagtcatcctcagctttctccaccttcgtc 921
Query: 181 acgattgtaaccgatttcctcgggtgctcatttacggccaagtgtaaaacatctggtctc 240
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 920 acgaatgtaaccgatttcctcgggtgctcatttacggtcaagtgtaaaacatctggtctc 861
Query: 241 gagtaatgtccaaccgaatcgaagtataacttggctcttgttatatcaccaagatcaata 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 860 gagtaatgtccaaccgaatcgaagtataacttggctcttgctatatcaccaagatcaata 801
Query: 301 tcagctgcgacga 313
||||||| |||||
Sbjct: 800 tcagctgtgacga 788
>At3g44310.1 68416.m04758 nitrilase 1 (NIT1) identical to SP|P32961 Nitrilase 1
(EC 3.5.5.1) {Arabidopsis thaliana}
Length = 1338
Score = 486 bits (245), Expect = e-137
Identities = 295/313 (94%)
Strand = Plus / Minus
Query: 1 tattacttgactccatagatcttaccattgaagagaaagataaataaacttgaacataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1216 tattacttgactccatagatcttaccattgaagagaaagataaataaacttgaacataaa 1157
Query: 61 atgaaaacgcaacagaacatgggggngttgactccatacgattgacataattccagcaga 120
|||||||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 1156 atgaaaacgcaacagaacattttggacttgactccatacgattgacataactccagcaga 1097
Query: 121 tacgaacttcacgtntcttantattggggggagtcatcctcagntttctccaccttcgtc 180
||||||||||| || ||||| |||| | ||||||||||||| ||||||||||||||||
Sbjct: 1096 tacgaacttcaagtctcttactatttgtttgagtcatcctcagctttctccaccttcgtc 1037
Query: 181 acgattgtaaccgatttcctcgggtgctcatttacggccaagtgtaaaacatctggtctc 240
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1036 acgaatgtaaccgatttcctcgggtgctcatttacggtcaagtgtaaaacatctggtctc 977
Query: 241 gagtaatgtccaaccgaatcgaagtataacttggctcttgttatatcaccaagatcaata 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 976 gagtaatgtccaaccgaatcgaagtataacttggctcttgctatatcaccaagatcaata 917
Query: 301 tcagctgcgacga 313
||||||| |||||
Sbjct: 916 tcagctgtgacga 904
>At3g44300.1 68416.m04757 nitrilase 2 (NIT2) identical to SP|P32962 Nitrilase 2
(EC 3.5.5.1) {Arabidopsis thaliana}
Length = 1423
Score = 186 bits (94), Expect = 7e-47
Identities = 141/157 (89%)
Strand = Plus / Minus
Query: 151 gagtcatcctcagntttctccaccttcgtcacgattgtaaccgatttcctcgggtgctca 210
|||||||| || | |||||||||||||| | || ||| |||| |||| |||||||||||
Sbjct: 1050 gagtcatcttccgctttctccaccttcgaaatgaatgtgaccggtttcttcgggtgctca 991
Query: 211 tttacggccaagtgtaaaacatctggtctcgagtaatgtccaaccgaatcgaagtataac 270
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 990 tttacggtcaagtgtaaaacatctggtctcgagtaatgtccaaccgaatcgaagtacaac 931
Query: 271 ttggctcttgttatatcaccaagatcaatatcagctg 307
|| ||||||| || |||||||||||||| ||||||||
Sbjct: 930 ttagctcttgctacatcaccaagatcaagatcagctg 894
>At3g44320.1 68416.m04760 nitrilase 3 (NIT3) identical to SP|P46010 Nitrilase 3
(EC 3.5.5.1) {Arabidopsis thaliana}
Length = 1396
Score = 168 bits (85), Expect = 2e-41
Identities = 141/160 (88%)
Strand = Plus / Minus
Query: 154 tcatcctcagntttctccaccttcgtcacgattgtaaccgatttcctcgggtgctcattt 213
|||||||| | |||||| |||||||||| || |||||||| |||| ||||||||||||||
Sbjct: 1065 tcatcctctgctttctcgaccttcgtcatgaatgtaaccggtttcttcgggtgctcattt 1006
Query: 214 acggccaagtgtaaaacatctggtctcgagtaatgtccaaccgaatcgaagtataacttg 273
|||| ||||| |||| |||||| | ||||||||||||||| ||||||||||||||||
Sbjct: 1005 acggtcaagttaaaaatatctggctttgagtaatgtccaaccacatcgaagtataacttg 946
Query: 274 gctcttgttatatcaccaagatcaatatcagctgcgacga 313
||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 945 gctcttgctatatcaccaagatcaagatcagctgtgacga 906
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 27 attgaagagaaagataaataaacttgaacat 57
|||||||||||||| ||||||||||||||||
Sbjct: 1178 attgaagagaaagaaaaataaacttgaacat 1148
>At5g22300.1 68418.m02601 nitrilase 4 (NIT4) identical to SP|P46011 Nitrilase 4
(EC 3.5.5.1) {Arabidopsis thaliana}
Length = 1412
Score = 36.2 bits (18), Expect = 0.17
Identities = 57/70 (81%)
Strand = Plus / Minus
Query: 238 ctcgagtaatgtccaaccgaatcgaagtataacttggctcttgttatatcaccaagatca 297
|||||||||||||| ||| ||| || | |||||||||| || ||| || ||||||||
Sbjct: 1160 ctcgagtaatgtccgaccacatcaaaatcaaacttggctcgtgctatgtccccaagatct 1101
Query: 298 atatcagctg 307
| ||||||||
Sbjct: 1100 agatcagctg 1091
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7755
Number of Sequences: 29161
Number of extensions: 7755
Number of successful extensions: 586
Number of sequences better than 10.0: 16
length of query: 313
length of database: 44,058,232
effective HSP length: 16
effective length of query: 297
effective length of database: 43,591,656
effective search space: 12946721832
effective search space used: 12946721832
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)