BLASTX 1.5.4-Paracel [2003-06-05]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BE039561.f
(1352 letters)
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
1,895,298 sequences; 629,712,918 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_145565.3| similar to Apopolysialoglycoprotein precur... 57 1e-06
ref|XP_357157.1| similar to Apopolysialoglycoprotein precur... 56 2e-06
ref|NP_744060.1| ribonuclease E [Pseudomonas putida KT2440]... 55 3e-06
ref|XP_410479.1| hypothetical protein AN6342.2 [Aspergillus... 55 4e-06
ref|NP_901490.1| probable ribonuclease E [Chromobacterium v... 55 5e-06
ref|NP_354858.1| AGR_C_3445p [Agrobacterium tumefaciens str... 55 5e-06
ref|NP_956894.1| hypothetical protein MGC63522 [Danio rerio... 54 6e-06
ref|NP_998629.1| zgc:55535 [Danio rerio]|gi|28277610|gb|AAH... 54 8e-06
ref|NP_080121.1| RIKEN cDNA 1110021E09 [Mus musculus]|gi|29... 54 8e-06
dbj|BAB23062.1| unnamed protein product [Mus musculus] 54 1e-05
>ref|XP_145565.3| similar to Apopolysialoglycoprotein precursor (PSGP) [Mus musculus]
Length = 394
Score = 56.6 bits (135), Expect = 1e-06
Identities = 63/225 (28%), Positives = 78/225 (34%), Gaps = 27/225 (12%)
Frame = +3
Query: 198 DARRSRPQRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQGETQRGPREQRAG 377
D +R P P G + R E PS D E+ P P +ETQ E GPR Q
Sbjct: 92 DTKREHPPGPHGQETQR--EHPSGPCAQDTKR---EHPPGPRAQETQREHPPGPRAQDTK 146
Query: 378 ATGDEGK*KRERTRGTTPQTHNTET---HP---------RKRDGAPRQRRQSRNSAAGRE 521
G +E R P HN ET HP RK PR + R G
Sbjct: 147 REHPPGPRDQETQREHLPGPHNQETQREHPPGLGTRETQRKHPPGPRDQETQREHPPGPR 206
Query: 522 PRRHSNESRPADTPRTXEEPGQRVEDRRTKQDQNER----KARATEKPTTGARPARTGXX 689
R E P PR E + R ++ Q E +AR T++ T P G
Sbjct: 207 ARETQREHPPG--PRGQETQREHPPGPRARETQREHPPGPRARETQREHT---PGPRGQD 261
Query: 690 RERQ------ATK*RNRHRQKGHAHERQRA-----SAGTDDNGNP 791
+R+ A + H A E QR S D G P
Sbjct: 262 TQREHPPGLHAQDTKREHPPGPRAQETQREHPPGFSCSRDSEGEP 306
Score = 39.7 bits (91), Expect = 0.16
Identities = 39/136 (28%), Positives = 48/136 (34%), Gaps = 4/136 (2%)
Frame = +3
Query: 285 AHEDGSENTPLPTQRETQGETQRGPREQ---RAGATGDEG-K*KRERTRGTTPQTHNTET 452
A E E+ P +ETQ E GPR Q R G G + +RE GT Q E
Sbjct: 38 AQETQREHPSGPRAQETQREHPPGPRAQDTKREHPPGPHGQETQREHPPGTRAQDTKRE- 96
Query: 453 HPRKRDGAPRQRRQSRNSAAGREPRRHSNESRPADTPRTXEEPGQRVEDRRTKQDQNERK 632
HP G QR A R H R +T R PG R +D + + R
Sbjct: 97 HPPGPHGQETQREHPSGPCAQDTKREHPPGPRAQETQR-EHPPGPRAQDTKREHPPGPRD 155
Query: 633 ARATEKPTTGARPART 680
+ G T
Sbjct: 156 QETQREHLPGPHNQET 171
Score = 37.4 bits (85), Expect = 0.78
Identities = 31/132 (23%), Positives = 45/132 (33%), Gaps = 2/132 (1%)
Frame = +3
Query: 291 EDGSENTPLPTQRETQGETQRGPREQRAGATGDEGK*KRERTRGTTPQTHNTETHPRKRD 470
E E+ P +ETQ E GPR Q G ++ R P H ET
Sbjct: 27 ETQREHPQGPRAQETQREHPSGPRAQETQREHPPGPRAQDTKREHPPGPHGQETQREHPP 86
Query: 471 GAPRQ--RRQSRNSAAGREPRRHSNESRPADTPRTXEEPGQRVEDRRTKQDQNERKARAT 644
G Q +R+ G+E +R A + PG R ++ + + R
Sbjct: 87 GTRAQDTKREHPPGPHGQETQREHPSGPCAQDTKREHPPGPRAQETQREHPPGPRAQDTK 146
Query: 645 EKPTTGARPART 680
+ G R T
Sbjct: 147 REHPPGPRDQET 158
>ref|XP_357157.1| similar to Apopolysialoglycoprotein precursor (PSGP) [Mus musculus]
Length = 369
Score = 55.8 bits (133), Expect = 2e-06
Identities = 57/209 (27%), Positives = 73/209 (34%), Gaps = 11/209 (5%)
Frame = +3
Query: 198 DARRSRPQRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQGETQRGPREQRAG 377
D +R P P G + R E PS D E+ P P +ETQ E GPR Q
Sbjct: 80 DTKREHPPGPRGQETQR--EHPSGPRAQDTKR---EHPPGPRAQETQREHPPGPRAQDTK 134
Query: 378 ATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRN--SAAGREPRRHSNESRP 551
G +E R P HN ET G + Q ++ G+E +R
Sbjct: 135 REHPPGPRDQETQREHLPGPHNQETQREHPPGLGTRETQRKHPPGPRGQETQREHPPGPR 194
Query: 552 ADTPRTXEEPGQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRER----QATK*RN 719
A R PG R + + + R + T G R T RE +A +
Sbjct: 195 ARETRREHPPGPRARETQREHPPGPRARETQREHTPGPRGQDT--QREHPPGLRAQDTKR 252
Query: 720 RHRQKGHAHERQRA-----SAGTDDNGNP 791
H HA E QR S D G P
Sbjct: 253 EHPPGPHAQETQREHPPGFSCSRDSEGAP 281
Score = 34.3 bits (77), Expect = 6.6
Identities = 41/168 (24%), Positives = 61/168 (35%), Gaps = 10/168 (5%)
Frame = +3
Query: 285 AHEDGSENTPLPTQRETQGETQRGPREQ---RAGATGDEGK*KRERTRGTTPQTHNTETH 455
A E E+ P +ETQ E GPR Q R G G+ + +R + P+ +T+
Sbjct: 52 AQETQREHPQGPRAQETQREHPPGPRAQDTKREHPPGPRGQ-ETQREHPSGPRAQDTK-- 108
Query: 456 PRKRDGAPRQRRQSRNSAAGREPRRHSNESRPADTPRTXEEPGQRVEDRRTKQDQNER-K 632
R+ PR + R G PR + PR E + + ++ Q E
Sbjct: 109 -REHPPGPRAQETQREHPPG--PRAQDTKREHPPGPRDQETQREHLPGPHNQETQREHPP 165
Query: 633 ARATEKPTTGARPARTGXXRERQ------ATK*RNRHRQKGHAHERQR 758
T + P G +R+ A + R H A E QR
Sbjct: 166 GLGTRETQRKHPPGPRGQETQREHPPGPRARETRREHPPGPRARETQR 213
>ref|NP_744060.1| ribonuclease E [Pseudomonas putida KT2440]|gi|24983416|gb|AAN67524.1|
ribonuclease E [Pseudomonas putida KT2440]
Length = 1091
Score = 55.5 bits (132), Expect = 3e-06
Identities = 43/176 (24%), Positives = 64/176 (35%), Gaps = 12/176 (6%)
Frame = +3
Query: 213 RPQRPSGTQPPRDTETP-SNTAKADAHEDGSENTPLPTQRETQGETQRGPREQRAGATGD 389
+P+ + PR+ P A + E P + + R PRE R G G+
Sbjct: 620 KPREERAERAPREERAPREERAPREERAPREERAPREERAPREERAPRQPREDRRGNRGE 679
Query: 390 EGK*KRERTRGTTPQTHNTETHPR-----------KRDGAPRQRRQSRNSAAGREPRRHS 536
E + TP E PR + + APR+ R R A RE R
Sbjct: 680 ERVRELREPLDATPPAEREERQPREERVAREERAPREERAPREERAPREERAPREERAPR 739
Query: 537 NESRPADTPRTXEEPGQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRERQA 704
E P + EE R E+R ++++ R+ RA P +P E+ A
Sbjct: 740 EERAPREERAPREERAPR-EERAPREERAPREERAPRPPREERQPRAAEEATEQAA 794
Score = 48.9 bits (115), Expect = 3e-04
Identities = 45/188 (23%), Positives = 73/188 (37%), Gaps = 2/188 (1%)
Frame = +3
Query: 198 DARRSRPQRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQGETQRGPREQRAG 377
D + P P+ +P + +P N + + + R + + +R PRE+RA
Sbjct: 576 DEPAAAPVAPAAEKPAAE-RSPRNEERRNGRQQSRN-------RNGRRDEERKPREERAE 627
Query: 378 ATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGREPRRHSNESRPAD 557
E + RE + E PR+ + APR+ R R A R+PR +R +
Sbjct: 628 RAPREERAPREE------RAPREERAPRE-ERAPREERAPREERAPRQPREDRRGNRGEE 680
Query: 558 TPRTXEEP--GQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRERQATK*RNRHRQ 731
R EP +R +Q + ER AR P P RE +A + R+
Sbjct: 681 RVRELREPLDATPPAEREERQPREERVAREERAPREERAPREERAPREERAPREERAPRE 740
Query: 732 KGHAHERQ 755
+ E +
Sbjct: 741 ERAPREER 748
Score = 43.9 bits (102), Expect = 0.008
Identities = 53/242 (21%), Positives = 86/242 (34%)
Frame = +3
Query: 3 ERATKKQKAHGAAARARIPYRSKRQGRRNKQRRALENDADXXXXXXXXXXXXXXXXXXXX 182
ER ++++A A R P R+ R ++ RA +
Sbjct: 618 ERKPREERAERAPREERAP----REERAPREERAPREERAPREERAPREERAPRQPREDR 673
Query: 183 XXXXXDARRSRPQRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQGETQRGPR 362
+ R + P PP + E + A E+ + + E +R PR
Sbjct: 674 RGNRGEERVRELREPLDATPPAEREERQPREERVAREERAPREERAPREERAPREERAPR 733
Query: 363 EQRAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGREPRRHSNE 542
E+RA E + RE + E PR+ + APR+ R A R PR
Sbjct: 734 EERAPR---EERAPREERAPREERAPREERAPRE-ERAPREER------APRPPREERQ- 782
Query: 543 SRPADTPRTXEEPGQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRERQATK*RNR 722
PR EE ++ + +Q E + ++ T G RP R + R++ + R R
Sbjct: 783 ------PRAAEEATEQAAELAEEQLPGEELLQDEQEGTDGERPRRRSRGQRRRSNR-RER 835
Query: 723 HR 728
R
Sbjct: 836 QR 837
Score = 33.9 bits (76), Expect = 8.7
Identities = 27/110 (24%), Positives = 39/110 (34%)
Frame = +3
Query: 429 PQTHNTETHPRKRDGAPRQRRQSRNSAAGREPRRHSNESRPADTPRTXEEPGQRVEDRRT 608
P + + +R+G R+QSRN R+ R E R PR P + R
Sbjct: 590 PAAERSPRNEERRNG----RQQSRNRNGRRDEERKPREERAERAPREERAPREERAPREE 645
Query: 609 KQDQNERKARATEKPTTGARPARTGXXRERQATK*RNRHRQKGHAHERQR 758
+ + ER R P RE +A + R+ ER R
Sbjct: 646 RAPREERAPREERAP------------REERAPRQPREDRRGNRGEERVR 683
>ref|XP_410479.1| hypothetical protein AN6342.2 [Aspergillus nidulans FGSC
A4]|gi|40739536|gb|EAA58726.1| hypothetical protein
AN6342.2 [Aspergillus nidulans FGSC A4]
Length = 968
Score = 55.1 bits (131), Expect = 4e-06
Identities = 51/259 (19%), Positives = 93/259 (35%), Gaps = 9/259 (3%)
Frame = +3
Query: 42 ARARIPYRSKRQGRRNKQRRALENDADXXXXXXXXXXXXXXXXXXXXXXXXXDARRSRPQ 221
+R+R+P RS + R + R++E+DA D R R +
Sbjct: 643 SRSRVPSRSSSRRRYRPRSRSVEDDA-----------------------TDYDRPRERRR 679
Query: 222 RPSGTQPPR--DTETPSNTAKADAHEDGSENTPLPTQRETQGETQRGPREQRAGATGDEG 395
RP + R + E S + D+H + +R + R + A+GD
Sbjct: 680 RPHHDERDRTAEDERRSRSPSIDSHRSSLRDKERDRRRARRSRRSHRRRSRSRSASGDRN 739
Query: 396 K*KRERTR------GTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGREPRRHSNE-SRPA 554
R+ R + P++ N +T R G R R+ + R+ RR E R
Sbjct: 740 GDSRDTDRFAEERSSSKPRSRNADTLDTHRSGKDRSSRREEDRERDRDSRRRDRERDRDR 799
Query: 555 DTPRTXEEPGQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRERQATK*RNRHRQK 734
D R + R+ ++ ++D++ + R E+ R + ++ + H +K
Sbjct: 800 DRDRDRDRDRDRIREKERERDRDRERPR--ERDRDRERDRKRSRRDRSESAADSDYHSRK 857
Query: 735 GHAHERQRASAGTDDNGNP 791
A T + P
Sbjct: 858 AKRGREDDARTSTSNRDRP 876
Score = 42.4 bits (98), Expect = 0.024
Identities = 44/197 (22%), Positives = 75/197 (37%), Gaps = 9/197 (4%)
Frame = +3
Query: 225 PSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRE------TQGETQRGPREQRA--GA 380
P+ PR A A G NT + QR + +GP +
Sbjct: 552 PAPNMQPRGPGVEGAPAAPRAMRQGLPNTSVFRQRNFHLVGRVPNQPSKGPEVSQTPHAE 611
Query: 381 TGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGR-EPRRHSNESRPAD 557
E + + +R + + + PR R + R R SR+S+ R PR S E D
Sbjct: 612 PTSEDQRPQSSSRSISRARSRSRSKPRSRSRS-RSRVPSRSSSRRRYRPRSRSVEDDATD 670
Query: 558 TPRTXEEPGQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRERQATK*RNRHRQKG 737
R E + D R + ++ER++R+ + + R+++ + R R ++
Sbjct: 671 YDRPRERRRRPHHDERDRTAEDERRSRSP------SIDSHRSSLRDKERDRRRARRSRRS 724
Query: 738 HAHERQRASAGTDDNGN 788
H + SA D NG+
Sbjct: 725 HRRRSRSRSASGDRNGD 741
Score = 34.7 bits (78), Expect = 5.1
Identities = 40/222 (18%), Positives = 76/222 (34%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 ERATKKQKAHGAAARARIPYRSKRQGRRNKQRRALENDADXXXXXXXXXXXXXXXXXXXX 182
ER++ K ++ A + R G+ RR + + D
Sbjct: 751 ERSSSKPRSRNADT-----LDTHRSGKDRSSRREEDRERDRDSRRRDRERDRDRDRDRDR 805
Query: 183 XXXXXDARRSRPQRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQGETQRGPR 362
R +R + PR+ + + + D SE+ + + R
Sbjct: 806 DRDRDRIREKERERDRDRERPRERDRDRERDRKRSRRDRSESAADSDYHSRKAKRGREDD 865
Query: 363 EQRAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQR--RQSRNSAAGREPRRHS 536
+ + + D K RE+T T P + H +R+ R+R ++ + A + R
Sbjct: 866 ARTSTSNRDRPKDTREKTLLTNPPEPEKDPHTLEREARNRERLLKEQQRREAMQADRDAG 925
Query: 537 NESRPADTPRTXEEPGQRVEDRRTKQDQNERKARATEKPTTG 662
SR D+ + E G+R+ + + R AR + G
Sbjct: 926 KSSRRRDSRQ--ERAGRRLNYKYDDETDAARAARVEREREAG 965
>ref|NP_901490.1| probable ribonuclease E [Chromobacterium violaceum ATCC
12472]|gi|34103131|gb|AAQ59494.1| probable ribonuclease E
[Chromobacterium violaceum ATCC 12472]
Length = 981
Score = 54.7 bits (130), Expect = 5e-06
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 11/171 (6%)
Frame = +3
Query: 306 NTPLPTQRETQGETQRGPREQRAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQ 485
N P +R T G+ +R EQR DEGK +R R + + P +++ R
Sbjct: 593 NRQRPHERRTGGQARR-EHEQRRNGQQDEGKSRRPDERKDAERAERAD-RPERKEAPSRD 650
Query: 486 RRQSRNSAAGREPRRHSNESRPADTPRTXEEPG---QRVEDRRTKQDQNERKARATEKPT 656
R + R RR E R P+ E +RV ++ KQD+ +++ R + P
Sbjct: 651 REERNEQPRERGSRRREREGREPREPKEVREQAPREERVSEKAEKQDKPQQEPRRRQAPA 710
Query: 657 TGARPARTGXXRE--------RQATK*RNRHRQKGHAHERQRASAGTDDNG 785
A E QA + R R++ +RQR ++ +G
Sbjct: 711 AAPAEAVEKPLHEELRLDAEGEQAEQERGERRRRRSRRDRQRDTSKAQQDG 761
Score = 37.7 bits (86), Expect = 0.60
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Frame = +3
Query: 201 ARRSRPQRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQGETQRGPREQRAGA 380
ARR QR +G Q + P A+ +E P ++E RE+R
Sbjct: 606 ARREHEQRRNGQQDEGKSRRPDERKDAER----AERADRPERKEAPSR----DREERNEQ 657
Query: 381 TGDEGK*KRERTRGTTPQTHNTETHPRK-RDGAPRQRRQSRNSAAGREP-----RRHSNE 542
+ G +RER G P+ P++ R+ APR+ R S + +P RR +
Sbjct: 658 PRERGSRRRER-EGREPR------EPKEVREQAPREERVSEKAEKQDKPQQEPRRRQAPA 710
Query: 543 SRPADTPR--TXEEPGQRVEDRRTKQDQNERKARATEK 650
+ PA+ EE E + +Q++ ER+ R + +
Sbjct: 711 AAPAEAVEKPLHEELRLDAEGEQAEQERGERRRRRSRR 748
Score = 34.7 bits (78), Expect = 5.1
Identities = 34/156 (21%), Positives = 61/156 (38%), Gaps = 6/156 (3%)
Frame = +3
Query: 318 PTQRETQGETQRG----PREQRAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQ 485
P Q ++G QRG P E+R G G+ +RE H ++R+G
Sbjct: 580 PVQSSSRGNEQRGNRQRPHERRTG-----GQARRE--------------HEQRRNG---- 616
Query: 486 RRQSRNSAAGREPRRHSNESRPADTPRTXEEPGQRVEDR--RTKQDQNERKARATEKPTT 659
+Q + + R+ + + AD P E P + E+R + ++ + R+ R +P
Sbjct: 617 -QQDEGKSRRPDERKDAERAERADRPERKEAPSRDREERNEQPRERGSRRREREGREPRE 675
Query: 660 GARPARTGXXRERQATK*RNRHRQKGHAHERQRASA 767
ER + K + + + RQ +A
Sbjct: 676 PKEVREQAPREERVSEKAEKQDKPQQEPRRRQAPAA 711
Score = 34.7 bits (78), Expect = 5.1
Identities = 33/136 (24%), Positives = 52/136 (37%), Gaps = 2/136 (1%)
Frame = +1
Query: 181 QNESGRTR--DEADPSAPAERNHRETRRHPAXXXXXXXXXXXXXXHHYPRRERPRAKPKG 354
Q + G++R DE + AER R R+ A RRER +P+
Sbjct: 617 QQDEGKSRRPDERKDAERAERADRPERKE-APSRDREERNEQPRERGSRRREREGREPRE 675
Query: 355 GRGSREPAPRATRVSRREREQGERHPKHTTQRPTRGSETEPRDSDDKAETAQRAASRDAT 534
+ RE APR RVS + +Q + + ++ + E + E A A
Sbjct: 676 PKEVREQAPREERVSEKAEKQDKPQQEPRRRQAPAAAPAEAVEKPLHEELRLDAEGEQAE 735
Query: 535 ATSHDQQTRRGRXKSQ 582
+++ RR R Q
Sbjct: 736 QERGERRRRRSRRDRQ 751
>ref|NP_354858.1| AGR_C_3445p [Agrobacterium tumefaciens str.
C58]|gi|17935767|ref|NP_532557.1| OmpA family protein
[Agrobacterium tumefaciens str.
C58]|gi|25519314|pir||B97586 hypothetical protein
AGR_C_3445 [imported] - Agrobacterium tumefaciens
(strain C58, Cereon)|gi|25522409|pir||AC2807 OmpA family
protein [imported] - Agrobacterium tumefaciens (strain
C58, Dupont)|gi|15156995|gb|AAK87643.1| AGR_C_3445p
[Agrobacterium tumefaciens str.
C58]|gi|17740325|gb|AAL42873.1| OmpA family protein
[Agrobacterium tumefaciens str. C58]
Length = 754
Score = 54.7 bits (130), Expect = 5e-06
Identities = 50/181 (27%), Positives = 71/181 (38%), Gaps = 25/181 (13%)
Frame = +3
Query: 207 RSRPQRPS-GTQPPRDTETPSNTAKADAH-EDGSENTPLPTQRETQGETQRGPREQ---- 368
++ P+R +P R+ E A A+ E E P P QRE + E P EQ
Sbjct: 85 QAEPKREERAPEPQREPEPKREAAPAEPRPEPKREAPPEPQQREARPEPAPAPAEQPQER 144
Query: 369 -----RAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGR--EPR 527
RA EG+ + R R P+ E P++R P++ Q R PR
Sbjct: 145 PRKPERAQEPQGEGEQRPARQREAAPEAAPAEQQPQERPRKPQKAEQPAGEGEQRPERPR 204
Query: 528 RHSN-------ESRPADTPRTXEEPGQRVEDRRTKQDQ-----NERKARATEKPTTGARP 671
+ E +PA P E+P + E K+ Q E+KA EKP +P
Sbjct: 205 KEKEPAKEPAAEQQPAARPENAEQPAKPREPAPGKKPQVEEKAPEQKAEPAEKPVPEKKP 264
Query: 672 A 674
A
Sbjct: 265 A 265
>ref|NP_956894.1| hypothetical protein MGC63522 [Danio
rerio]|gi|34783761|gb|AAH56776.1| Hypothetical protein
MGC63522 [Danio rerio]
Length = 629
Score = 54.3 bits (129), Expect = 6e-06
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Frame = +3
Query: 291 EDGSENTPLPTQRET-QGETQRGPREQRAGATGDEGK*KRERTRGTTPQTHNTETHPRKR 467
+ G +T +E +G RE+R G G RE+ P+ + KR
Sbjct: 136 QKGKPSTSRSQDKENREGREHHRDREERKGIKESSGS--REQKDPDQPKDQES-----KR 188
Query: 468 DGAPRQRRQSRNSAAGREPRRHSNESRPADTPRTXEEPGQRVEDRRTKQDQNERKARATE 647
D R RR + S GRE R + R D R E+ R ++R ++D+N K R +
Sbjct: 189 DDKDR-RRDAERSDKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDRNREKERERD 247
Query: 648 KPTTGARPARTGXXRERQATK*RNRHRQKGHAHERQR 758
K + + RER + R + R+K ER R
Sbjct: 248 KDRDKKKERESHKDRERDKDREREKRREKEKDKERPR 284
Score = 37.4 bits (85), Expect = 0.78
Identities = 32/146 (21%), Positives = 52/146 (34%), Gaps = 3/146 (2%)
Frame = +1
Query: 163 REPRALQNESGRTRDEADPSAPAERNHR---ETRRHPAXXXXXXXXXXXXXXHHYPRRER 333
RE R ES +R++ DP P ++ + + RR A RER
Sbjct: 160 REERKGIKESSGSREQKDPDQPKDQESKRDDKDRRRDAERSDKGR-----------ERER 208
Query: 334 PRAKPKGGRGSREPAPRATRVSRREREQGERHPKHTTQRPTRGSETEPRDSDDKAETAQR 513
+ + + SR+ TR RERE+ K + R + E D+ R
Sbjct: 209 TKDRDRDKDKSRDREKDKTREKEREREKDRNREKERERDKDRDKKKERESHKDRERDKDR 268
Query: 514 AASRDATATSHDQQTRRGRXKSQDKG 591
+ ++ R K +D+G
Sbjct: 269 EREKRREKEKDKERPRETEEKLKDRG 294
>ref|NP_998629.1| zgc:55535 [Danio rerio]|gi|28277610|gb|AAH44189.1| Zgc:55535 [Danio
rerio]
Length = 687
Score = 53.9 bits (128), Expect = 8e-06
Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 1/263 (0%)
Frame = +3
Query: 3 ERATKKQKAHGAAARARIPYRSKRQGRRNKQRRALENDADXXXXXXXXXXXXXXXXXXXX 182
E+ K+ + ++ R R K + + ++ + DAD
Sbjct: 419 EKKVSKRDKSRSPSKGRDRKRDKHRSKSRERDARKKPDADAEKKKSRSRSKSKDKKREKE 478
Query: 183 XXXXXDARRSRP-QRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQGETQRGP 359
D +R R + + D E + +DG + +++ GE +R
Sbjct: 479 KSKKPDDKRGRSASKEKDRKEKNDKEVEQKDRSKERAKDGEKEKSKEVEKKKNGERERSR 538
Query: 360 REQRAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGREPRRHSN 539
+++ +R R+RG R + G R R + R ++ RE R+ S+
Sbjct: 539 SKEKGRDVS-----RRSRSRG------------RGQRGQSRDRGRDRRHSSSRE-RKTSH 580
Query: 540 ESRPADTPRTXEEPGQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRERQATK*RN 719
SR + R G+ EDRR D R+ R ++ +ER + K R+
Sbjct: 581 RSRSRERAR-----GRDAEDRRKSADNKSRETRGRDR-----------SSKERSSQKQRS 624
Query: 720 RHRQKGHAHERQRASAGTDDNGN 788
R R+ + ++ G+ D+ N
Sbjct: 625 REREDRQKRRKDKSDTGSSDSDN 647
Score = 42.4 bits (98), Expect = 0.024
Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 22/189 (11%)
Frame = +3
Query: 276 KADAHEDGSENTPLPTQRETQGETQRGPREQRAGATGDEGK*KRERTRGTTP-------- 431
K D E+ ++ T L + + +G+ Q R+ + ++ KR+++R +
Sbjct: 385 KGDMSEEKTKTTELSSVNKARGDKQDTARKN---SEQEKKVSKRDKSRSPSKGRDRKRDK 441
Query: 432 -QTHNTETHPRKRDGAPRQRRQSRNSAAGREPRRHSNESRPADTPR-------------T 569
++ + E RK+ A ++++SR+ + ++ +R +S+ D R
Sbjct: 442 HRSKSRERDARKKPDADAEKKKSRSRSKSKDKKREKEKSKKPDDKRGRSASKEKDRKEKN 501
Query: 570 XEEPGQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRERQATK*RNRHRQKGHAHE 749
+E Q+ + +D + K++ EK G R + R ++ R R +G
Sbjct: 502 DKEVEQKDRSKERAKDGEKEKSKEVEKKKNGERERSRSKEKGRDVSR---RSRSRGRGQR 558
Query: 750 RQRASAGTD 776
Q G D
Sbjct: 559 GQSRDRGRD 567
Score = 36.2 bits (82), Expect = 1.7
Identities = 37/171 (21%), Positives = 67/171 (38%), Gaps = 5/171 (2%)
Frame = +3
Query: 264 SNTAKADAHEDGSENTPLPTQRETQGETQRGPREQRAGATGDEGK*KRERTRGTT----- 428
S++ D+ D S ++ E++ E +R + ++ E K K++ +G+
Sbjct: 192 SSSESEDSSSDSSSDS-----EESEKEKKRRKKHKKEHKKKKESKHKKKEKKGSDEEEAE 246
Query: 429 PQTHNTETHPRKRDGAPRQRRQSRNSAAGREPRRHSNESRPADTPRTXEEPGQRVEDRRT 608
PQ +T P + P R R S + S E D+ R E P
Sbjct: 247 PQAVST-IRPEEVPPIPENRFLMRRSPEKPKEEEQSKEKDKVDSGR--ERP--------- 294
Query: 609 KQDQNERKARATEKPTTGARPARTGXXRERQATK*RNRHRQKGHAHERQRA 761
+D++ + R E+P +RP RT R + + R ++ R R+
Sbjct: 295 -RDRDRERERERERPMANSRPNRTRLVMTRSGRRIKGRGPRRYRTPSRSRS 344
>ref|NP_080121.1| RIKEN cDNA 1110021E09 [Mus musculus]|gi|29748090|gb|AAH50900.1|
RIKEN cDNA 1110021E09 [Mus
musculus]|gi|30354152|gb|AAH52077.1| RIKEN cDNA
1110021E09 [Mus musculus]
Length = 542
Score = 53.9 bits (128), Expect = 8e-06
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 3/194 (1%)
Frame = +3
Query: 198 DARRSRPQRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQG---ETQRGPREQ 368
+ RRSR R S + + S + + H S + L ++E Q E + +E+
Sbjct: 257 ERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 316
Query: 369 RAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGREPRRHSNESR 548
R + D G R R+R + + RK D R R + + + GR R ++ R
Sbjct: 317 RRSRSIDRGL-DRRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKER 375
Query: 549 PADTPRTXEEPGQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRERQATK*RNRHR 728
+D R E +R +++R++ D E+K + ++ R ++++ K +R R
Sbjct: 376 GSDRERDRERSRERSKEQRSRGDGEEKKHKEDKED-------RRHRDDKKESKKKHSRSR 428
Query: 729 QKGHAHERQRASAG 770
+ H + +AG
Sbjct: 429 SRERKHRSRSRNAG 442
Score = 44.7 bits (104), Expect = 0.005
Identities = 57/268 (21%), Positives = 103/268 (38%), Gaps = 26/268 (9%)
Frame = +3
Query: 30 HGAAARARIPYRS---KRQGRRNKQR-------------RALENDADXXXXXXXXXXXXX 161
H R+R P RS +R RR++ R R LE + +
Sbjct: 255 HVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREK 314
Query: 162 XXXXXXXXXXXXDARRSRP-QRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQ 338
D RRSR +R RD + + D + + +R+
Sbjct: 315 ERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGD----RRDRDREREKENERGRRRDRD 370
Query: 339 GETQRGPREQRAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGR 518
+ +RG +R E K +R+RG + + E +R ++ + ++S +
Sbjct: 371 YDKERGSDRERDRERSRERS-KEQRSRGDGEEKKHKEDKEDRRHRDDKKESKKKHSRSRS 429
Query: 519 EPRRHSNESRPADTPRTXEEPGQRVEDR---RTKQDQNERKARATEKPTTGARPARTGXX 689
R+H + SR A G+R R ++ + +NE K +A ++ +G++ RTG
Sbjct: 430 RERKHRSRSRNA---------GKRSRSRSKDKSSRHKNESKEKANKRSRSGSQ-GRTGSV 479
Query: 690 RERQ------ATK*RNRHRQKGHAHERQ 755
+R+ K R R R + +H+R+
Sbjct: 480 EKRKREHSPSREKSRKRSRSQDRSHKRE 507
Score = 39.3 bits (90), Expect = 0.21
Identities = 39/198 (19%), Positives = 71/198 (35%), Gaps = 2/198 (1%)
Frame = +1
Query: 1 QREQQRSRRRTAPQRAHAFHTGANVKDDETNKXXXXXXXXXXXXXXXXXXDAAGREPRAL 180
+R+++RSR R+ QR+ K+D +E R
Sbjct: 380 ERDRERSRERSKEQRSRGDGEEKKHKED--------------------------KEDRRH 413
Query: 181 QNESGRTRDEADPSAPAERNHRETRRHPAXXXXXXXXXXXXXXHHYPRRERPRAKPKGGR 360
+++ ++ + S ER HR R+ +R R R+K K R
Sbjct: 414 RDDKKESKKKHSRSRSRERKHRSRSRNAG------------------KRSRSRSKDKSSR 455
Query: 361 GSREPAPRATRVSRR--EREQGERHPKHTTQRPTRGSETEPRDSDDKAETAQRAASRDAT 534
E +A + SR + G + P+R + S D++ + S+D +
Sbjct: 456 HKNESKEKANKRSRSGSQGRTGSVEKRKREHSPSREKSRKRSRSQDRSHKREHNDSKDQS 515
Query: 535 ATSHDQQTRRGRXKSQDK 588
Q ++ G +SQ+K
Sbjct: 516 DRQDHQSSQSGEPESQEK 533
>dbj|BAB23062.1| unnamed protein product [Mus musculus]
Length = 290
Score = 53.5 bits (127), Expect = 1e-05
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 3/194 (1%)
Frame = +3
Query: 198 DARRSRPQRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQG---ETQRGPREQ 368
+ RRSR R S + + S + + H S + L ++E Q E + +E+
Sbjct: 5 ERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKER 64
Query: 369 RAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGREPRRHSNESR 548
R + D G R R+R + + RK D R R + + + GR R ++ R
Sbjct: 65 RRSRSIDRGL-DRRRSRSRERHRSRSRSRDRKWDRRDRDREREKENERGRRRDRDYDKER 123
Query: 549 PADTPRTXEEPGQRVEDRRTKQDQNERKARATEKPTTGARPARTGXXRERQATK*RNRHR 728
+D R E +R +++R++ D E+K + ++ R ++++ K +R R
Sbjct: 124 GSDRERDRERSRERSKEQRSRGDGEEKKHKEDKED-------RRHRDDKKESKKKHSRSR 176
Query: 729 QKGHAHERQRASAG 770
+ H + +AG
Sbjct: 177 SRERKHRSRSRNAG 190
Score = 44.7 bits (104), Expect = 0.005
Identities = 57/268 (21%), Positives = 103/268 (38%), Gaps = 26/268 (9%)
Frame = +3
Query: 30 HGAAARARIPYRS---KRQGRRNKQR-------------RALENDADXXXXXXXXXXXXX 161
H R+R P RS +R RR++ R R LE + +
Sbjct: 3 HVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREK 62
Query: 162 XXXXXXXXXXXXDARRSRP-QRPSGTQPPRDTETPSNTAKADAHEDGSENTPLPTQRETQ 338
D RRSR +R RD + + D + + +R+
Sbjct: 63 ERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKWD----RRDRDREREKENERGRRRDRD 118
Query: 339 GETQRGPREQRAGATGDEGK*KRERTRGTTPQTHNTETHPRKRDGAPRQRRQSRNSAAGR 518
+ +RG +R E K +R+RG + + E +R ++ + ++S +
Sbjct: 119 YDKERGSDRERDRERSRERS-KEQRSRGDGEEKKHKEDKEDRRHRDDKKESKKKHSRSRS 177
Query: 519 EPRRHSNESRPADTPRTXEEPGQRVEDR---RTKQDQNERKARATEKPTTGARPARTGXX 689
R+H + SR A G+R R ++ + +NE K +A ++ +G++ RTG
Sbjct: 178 RERKHRSRSRNA---------GKRSRSRSKDKSSRHKNESKEKANKRSRSGSQ-GRTGSV 227
Query: 690 RERQ------ATK*RNRHRQKGHAHERQ 755
+R+ K R R R + +H+R+
Sbjct: 228 EKRKREHSPSREKSRKRSRSQDRSHKRE 255
Score = 39.3 bits (90), Expect = 0.21
Identities = 39/198 (19%), Positives = 71/198 (35%), Gaps = 2/198 (1%)
Frame = +1
Query: 1 QREQQRSRRRTAPQRAHAFHTGANVKDDETNKXXXXXXXXXXXXXXXXXXDAAGREPRAL 180
+R+++RSR R+ QR+ K+D +E R
Sbjct: 128 ERDRERSRERSKEQRSRGDGEEKKHKED--------------------------KEDRRH 161
Query: 181 QNESGRTRDEADPSAPAERNHRETRRHPAXXXXXXXXXXXXXXHHYPRRERPRAKPKGGR 360
+++ ++ + S ER HR R+ +R R R+K K R
Sbjct: 162 RDDKKESKKKHSRSRSRERKHRSRSRNAG------------------KRSRSRSKDKSSR 203
Query: 361 GSREPAPRATRVSRR--EREQGERHPKHTTQRPTRGSETEPRDSDDKAETAQRAASRDAT 534
E +A + SR + G + P+R + S D++ + S+D +
Sbjct: 204 HKNESKEKANKRSRSGSQGRTGSVEKRKREHSPSREKSRKRSRSQDRSHKREHNDSKDQS 263
Query: 535 ATSHDQQTRRGRXKSQDK 588
Q ++ G +SQ+K
Sbjct: 264 DRQDHQSSQSGEPESQEK 281
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
Posted date: Jul 5, 2004 10:54 PM
Number of letters in database: 629,712,918
Number of sequences in database: 1,895,298
Lambda K H
0.306 0.121 0.339
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 129
effective length of database: 385,219,476
effective search space used: 123655451796
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)