BLASTN 2.2.3 [Apr-24-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Z46709.r
         (244 letters)

Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa 
           29,161 sequences; 44,058,232 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g15230.1  68415.m01737 lipase family protein similar to S...   470   e-132
At3g52200.1  68416.m05733 dihydrolipoamide S-acetyltransfera...    34   0.51 
At1g12580.1  68414.m01461 protein kinase family protein cont...    34   0.51 
At1g43590.1  68414.m05004 hypothetical protein contains Pfam...    32   2.0  
At1g19790.1  68414.m02475 lateral root primordium (LRP) prot...    32   2.0  

>At2g15230.1 68415.m01737 lipase family protein similar to SP|P07098
            Triacylglycerol lipase, gastric precursor (EC 3.1.1.3)
            {Homo sapiens}; contains Pfam profile PF04083:
            ab-hydrolase associated lipase region
          Length = 1458

 Score =  470 bits (237), Expect = e-132
 Identities = 242/244 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    atctaaactcatcgacgaccaatctatttcacttgagttactggattgttctatctgttc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 atctaaactcatcgacgaccaatctatttcacttgagttactggattgttctatctgttc 1399

                                                                        
Query: 61   atgtctagattggtgctaagtagctctttgaagcagaaaatttagttcaataggaaaata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1398 atgtctagattggtgctaagtagctctttgaagcagaaaatttagttcaataggaaaata 1339

                                                                        
Query: 121  tttacaatcagatgtgtacatatattngtggaagataaatatgtgcaaagcagaacagag 180
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1338 tttacaatcagatgtgtacatatatttgtggaagataaatatgtgcaaagcagaacagag 1279

                                                                        
Query: 181  tatttagtattttaccaactactagacttaacctttggtctgaaaaattgaatcatgtgc 240
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1278 tatttagtattttaccaactactagacttaacctttgctctgaaaaattgaatcatgtgc 1219

                
Query: 241  ttat 244
            ||||
Sbjct: 1218 ttat 1215



>At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase, putative similar
            to dihydrolipoamide acetyltransferase (E2) subunit of PDC
            [Arabidopsis thaliana] GI:559395; contains Pfam profiles
            PF00198: 2-oxo acid dehydrogenases acyltransferase
            (catalytic domain), PF00364: Biotin-requiring enzyme,
            PF02817: e3 binding domain; supporting cDNA
            gi|5881964|gb|AF066080.1|AF066080
          Length = 2321

 Score = 34.2 bits (17), Expect = 0.51
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 119  tatttacaatcagatgt 135
            |||||||||||||||||
Sbjct: 1411 tatttacaatcagatgt 1427



>At1g12580.1 68414.m01461 protein kinase family protein contains protein kinase
            domain, Pfam:PF00069; contains similarity to
            calcium-dependent protein kinase GI:5162877 from
            [Marchantia polymorpha]
          Length = 1972

 Score = 34.2 bits (17), Expect = 0.51
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 126  aatcagatgtgtacata 142
            |||||||||||||||||
Sbjct: 1877 aatcagatgtgtacata 1861



>At1g43590.1 68414.m05004 hypothetical protein contains Pfam domain, PF04827:
          Protein of unknown function (DUF635)
          Length = 507

 Score = 32.2 bits (16), Expect = 2.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                          
Query: 19 ccaatctatttcactt 34
          ||||||||||||||||
Sbjct: 84 ccaatctatttcactt 99



>At1g19790.1 68414.m02475 lateral root primordium (LRP) protein-related
          similar to lateral root primordium 1 (LRP1)
          [Arabidopsis thaliana] GI:882341; contains Pfam profile
          PF05142: Domain of unknown function (DUF702)
          Length = 1038

 Score = 32.2 bits (16), Expect = 2.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                          
Query: 41 ctggattgttctatct 56
          ||||||||||||||||
Sbjct: 5  ctggattgttctatct 20



  Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
    Posted date:  Jun 25, 2004 12:58 PM
  Number of letters in database: 44,058,232
  Number of sequences in database:  29,161
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6490
Number of Sequences: 29161
Number of extensions: 6490
Number of successful extensions: 513
Number of sequences better than 10.0: 31
length of query: 244
length of database: 44,058,232
effective HSP length: 16
effective length of query: 228
effective length of database: 43,591,656
effective search space: 9938897568
effective search space used: 9938897568
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)