BLASTX 1.5.4-Paracel [2003-06-05]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Z46681.r
         (354 letters)

Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr 
           1,895,298 sequences; 629,712,918 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_00304555.1|  COG1806: Uncharacterized protein conserv...    33   1.3  
gb|AAF13348.1|  TIP120 homolog [Eufolliculina uhligi]              31   4.9  
ref|NP_778156.1|  brain-specific angiogenesis inhibitor 1 [M...    31   6.5  

>ref|ZP_00304555.1| COG1806: Uncharacterized protein conserved in bacteria
          [Novosphingobium aromaticivorans DSM 12444]
          Length = 280

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -1

Query: 48 LMRLHLHLLSDSTGET 1
          + RLHLHLLSDSTGET
Sbjct: 1  MQRLHLHLLSDSTGET 16



>gb|AAF13348.1| TIP120 homolog [Eufolliculina uhligi]
          Length = 884

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 16/44 (36%), Positives = 26/44 (58%)
 Frame = -2

Query: 185 LAESSVVRTHVDKRPVIHQRDDALLDREVALALLPMLSTASPTR 54
           L + S++R  VD  P +HQ DD L+ R+ A +L+  + T  P +
Sbjct: 716 LVDQSLIRK-VDLGPFVHQIDDGLVLRKAAFSLIETILTQLPDK 758



>ref|NP_778156.1| brain-specific angiogenesis inhibitor 1 [Mus
           musculus]|gi|27362913|gb|AAN86966.1| brain-specific
           angiogenesis inhibitor 1 [Mus musculus]
          Length = 1582

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 53  AGWAMLWTTWGEALAQLRG-PAKRHPFGG*PAAYPHACAQPTIRLTGCGLWGQIE 214
           AG   LW+ WGE  A LRG PA  +P              PT+ + G G  G +E
Sbjct: 261 AGGLKLWSLWGECTAGLRGRPANSNP-----------TCLPTLGVEGGGCKGVLE 304



  Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
    Posted date:  Jul 5, 2004 10:54 PM
  Number of letters in database: 629,712,918
  Number of sequences in database:  1,895,298
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 93
effective length of database: 453,450,204
effective search space used: 10882804896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)