BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.25.C1
(3524 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-con... 6223 0.0
At4g28080.1 68417.m04027 expressed protein 159 2e-37
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-con... 100 2e-19
At3g51750.2 68416.m05675 expressed protein 42 0.032
At3g51750.1 68416.m05674 expressed protein 42 0.032
>At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containing protein low
similarity to SP|P46825 Kinesin light chain (KLC) {Loligo
pealeii}; contains Pfam profile PF00515: TPR Domain
Length = 5756
Score = 6223 bits (3139), Expect = 0.0
Identities = 3139/3139 (100%)
Strand = Plus / Plus
Query: 368 agcaagcagcatgttcatctgctgatggaaggcaacttctggagtcatctaaaacagctt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2612 agcaagcagcatgttcatctgctgatggaaggcaacttctggagtcatctaaaacagctt 2671
Query: 428 tagacaaaggaaagcttgaagatgcagttacatatggaacgaaggctcttgctaaactcg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2672 tagacaaaggaaagcttgaagatgcagttacatatggaacgaaggctcttgctaaactcg 2731
Query: 488 tagcagtttgcggtccctatcacagaatgacagccggagcttacagtttacttgctgtgg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2732 tagcagtttgcggtccctatcacagaatgacagccggagcttacagtttacttgctgtgg 2791
Query: 548 ttctatatcacactggtgactttaaccaggctacaatatatcagcaaaaggctttagaca 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2792 ttctatatcacactggtgactttaaccaggctacaatatatcagcaaaaggctttagaca 2851
Query: 608 tcaatgagagggaacttggacttgatcatccagatacaatgaagagttatggtgatcttg 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2852 tcaatgagagggaacttggacttgatcatccagatacaatgaagagttatggtgatcttg 2911
Query: 668 ctgtcttctattataggcttcagcatacagagctggctctcaagtatgttaagcgtgcgt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2912 ctgtcttctattataggcttcagcatacagagctggctctcaagtatgttaagcgtgcgt 2971
Query: 728 tgtatctcttacatctcacatgcggtccatctcatccaaatactgctgctacatacatca 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2972 tgtatctcttacatctcacatgcggtccatctcatccaaatactgctgctacatacatca 3031
Query: 788 atgtagccatgatggaggaaggtctaggaaatgtgcatgttgccttgaggtatcttcaca 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3032 atgtagccatgatggaggaaggtctaggaaatgtgcatgttgccttgaggtatcttcaca 3091
Query: 848 aagctctcaagtgtaatcaaaggttgcttggtccggaccatatccagactgctgcaagct 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3092 aagctctcaagtgtaatcaaaggttgcttggtccggaccatatccagactgctgcaagct 3151
Query: 908 accatgccatagcaattgcgctctccttgatggaggcataccatttaagtgttcagcatg 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3152 accatgccatagcaattgcgctctccttgatggaggcataccatttaagtgttcagcatg 3211
Query: 968 agcaaacaaccttaagaatccttcgagcaaagctggggccagatgatttacgtactcagg 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3212 agcaaacaaccttaagaatccttcgagcaaagctggggccagatgatttacgtactcagg 3271
Query: 1028 atgctgctgcttggctagaatactttgagtccaaggcttttgaacaacaagaagctgcgc 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3272 atgctgctgcttggctagaatactttgagtccaaggcttttgaacaacaagaagctgcgc 3331
Query: 1088 gaaatggtactcctaagccagacgcgtctatagccagcaaaggccacctaagtgtttccg 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3332 gaaatggtactcctaagccagacgcgtctatagccagcaaaggccacctaagtgtttccg 3391
Query: 1148 atctactcgactatatcaacccaagtcataacgcaaaaggcaaagagagcgtggcagcaa 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3392 atctactcgactatatcaacccaagtcataacgcaaaaggcaaagagagcgtggcagcaa 3451
Query: 1208 agaggaagaactatattctgaagctaaaggaaaaatccaagcaaagcaatgtttctgaac 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3452 agaggaagaactatattctgaagctaaaggaaaaatccaagcaaagcaatgtttctgaac 3511
Query: 1268 acttggtggaaattccgagagaaaagcaaaaggagatgtctgaagaggatacggaagaaa 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3512 acttggtggaaattccgagagaaaagcaaaaggagatgtctgaagaggatacggaagaaa 3571
Query: 1328 ctggatcagaagaaggtaaatcaagcgaagagaatcacgagacaattcttgcaccagttg 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3572 ctggatcagaagaaggtaaatcaagcgaagagaatcacgagacaattcttgcaccagttg 3631
Query: 1388 aagaaccaccttctcctccagtaattgaggacgctactatggataacagtaatccaatta 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3632 aagaaccaccttctcctccagtaattgaggacgctactatggataacagtaatccaatta 3691
Query: 1448 catctagcgacgtttcaaccgagccacaacaccctgatggtagtgaagatggatggcaac 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3692 catctagcgacgtttcaaccgagccacaacaccctgatggtagtgaagatggatggcaac 3751
Query: 1508 cggtgcaaagaccgagatctgctggatcatatggtcgcaggatgaagcaacggcgagcat 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3752 cggtgcaaagaccgagatctgctggatcatatggtcgcaggatgaagcaacggcgagcat 3811
Query: 1568 ccatcgggaaggtatatacatatcagaagaagaatgttgaagctgatatcgataaccctc 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3812 ccatcgggaaggtatatacatatcagaagaagaatgttgaagctgatatcgataaccctc 3871
Query: 1628 ttttccagaatgctactcagcagaacgacaaatactacattctcaagaagcgaacagcat 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3872 ttttccagaatgctactcagcagaacgacaaatactacattctcaagaagcgaacagcat 3931
Query: 1688 catattcaagctatgcagatcatcattctcctggtttaacaactcaaggcaccaaatttg 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3932 catattcaagctatgcagatcatcattctcctggtttaacaactcaaggcaccaaatttg 3991
Query: 1748 gcaggaagatagttaaaaccttggcgtatcgggttaaatcgacgcagccgtcttctggta 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3992 gcaggaagatagttaaaaccttggcgtatcgggttaaatcgacgcagccgtcttctggta 4051
Query: 1808 acgctaagactgctggtgaaacttcagaagaagatgggttgaagacagatgcttcttctg 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4052 acgctaagactgctggtgaaacttcagaagaagatgggttgaagacagatgcttcttctg 4111
Query: 1868 ttgagccacctactctgtctagtactgtgcaaagtgaagcctaccacacgaaaaactctg 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4112 ttgagccacctactctgtctagtactgtgcaaagtgaagcctaccacacgaaaaactctg 4171
Query: 1928 ttgtaagtcttggaaaatctccatcctacaaggaagtagcattggcaccacctggttcaa 1987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4172 ttgtaagtcttggaaaatctccatcctacaaggaagtagcattggcaccacctggttcaa 4231
Query: 1988 ttgctaagtatcaagtctgggttccacaagcggaagtttcagataagcaagaggatgatg 2047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4232 ttgctaagtatcaagtctgggttccacaagcggaagtttcagataagcaagaggatgatg 4291
Query: 2048 agatggagaaaaaaactgaacagggtacatcaatggagcttacaagggatgagcaaatga 2107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4292 agatggagaaaaaaactgaacagggtacatcaatggagcttacaagggatgagcaaatga 4351
Query: 2108 taacagggttagaggaagaggtaaaaaaggaaatttctgcagacccagaatctaacataa 2167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4352 taacagggttagaggaagaggtaaaaaaggaaatttctgcagacccagaatctaacataa 4411
Query: 2168 cccaaggcgaagaagagatcaaagtagagttacaaccatctgaaggagtactcggaggaa 2227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4412 cccaaggcgaagaagagatcaaagtagagttacaaccatctgaaggagtactcggaggaa 4471
Query: 2228 gtcatataaatgaaaacgacgaatctgggggtggaattcaggttgaagaacaagtcgaag 2287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4472 gtcatataaatgaaaacgacgaatctgggggtggaattcaggttgaagaacaagtcgaag 4531
Query: 2288 ttgaattgataaacgatggtgtaacagatatgattcattcgaccagagagcaacaagtga 2347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4532 ttgaattgataaacgatggtgtaacagatatgattcattcgaccagagagcaacaagtga 4591
Query: 2348 tagatcaattagctgctgattccgaagatctgaaggcaaaactgtcaatttctactacgg 2407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4592 tagatcaattagctgctgattccgaagatctgaaggcaaaactgtcaatttctactacgg 4651
Query: 2408 actcaggcgatgcctcacgaggattgttgcctaacaagaagctatctgcgtcagctgctc 2467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4652 actcaggcgatgcctcacgaggattgttgcctaacaagaagctatctgcgtcagctgctc 4711
Query: 2468 cattcaacccatcatcacctccaagtattatacgtcctactccaataggcatgaacattg 2527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4712 cattcaacccatcatcacctccaagtattatacgtcctactccaataggcatgaacattg 4771
Query: 2528 gaccgtcgtggccagtgaacatgactcttcatcacggacctcctcctccttacccttcac 2587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4772 gaccgtcgtggccagtgaacatgactcttcatcacggacctcctcctccttacccttcac 4831
Query: 2588 ctccgacaactccaaacttgatgcagccaatgtcctttgtttaccctcctccttacagtc 2647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4832 ctccgacaactccaaacttgatgcagccaatgtcctttgtttaccctcctccttacagtc 4891
Query: 2648 aatcagtccccacaagtacttaccctgtaacaagcggtccttttcatcccaatcagttcc 2707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4892 aatcagtccccacaagtacttaccctgtaacaagcggtccttttcatcccaatcagttcc 4951
Query: 2708 catggcagctcaatgtgtcggattttgtaccaagaacggtttggcctggatgccatcccg 2767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4952 catggcagctcaatgtgtcggattttgtaccaagaacggtttggcctggatgccatcccg 5011
Query: 2768 ttgagtttcccccaccgcacatgatcaccgagccaatagctgcaactgtgttagagccaa 2827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5012 ttgagtttcccccaccgcacatgatcaccgagccaatagctgcaactgtgttagagccaa 5071
Query: 2828 ctgtgattctgccaacggatattgacacttcaggtgtagaagaaaccaaagaaggcacgc 2887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5072 ctgtgattctgccaacggatattgacacttcaggtgtagaagaaaccaaagaaggcacgc 5131
Query: 2888 aagatgtggcagtcgccgatgaagttatggattctgttaaccatgtgaacaacgcagttg 2947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5132 aagatgtggcagtcgccgatgaagttatggattctgttaaccatgtgaacaacgcagttg 5191
Query: 2948 cacgcagtgaaacggagaatggaaaccggaaatctgaggaaggtgagaaaactttcagca 3007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5192 cacgcagtgaaacggagaatggaaaccggaaatctgaggaaggtgagaaaactttcagca 5251
Query: 3008 ttttgttaagagggaggagaaacaggaaacaaacactgagaatgccaatcagtttgctta 3067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5252 ttttgttaagagggaggagaaacaggaaacaaacactgagaatgccaatcagtttgctta 5311
Query: 3068 accggccttatgattctcaaccgttcaagcttggctatagcagagttatcagagacagcg 3127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5312 accggccttatgattctcaaccgttcaagcttggctatagcagagttatcagagacagcg 5371
Query: 3128 aggctccaaagtctgtagcttgaaacactctccaaagattgagctaattcgatgaaatgc 3187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5372 aggctccaaagtctgtagcttgaaacactctccaaagattgagctaattcgatgaaatgc 5431
Query: 3188 aaactcacacacacatctctgatatttgctgtttcatagggacaatataaaggtagtttc 3247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5432 aaactcacacacacatctctgatatttgctgtttcatagggacaatataaaggtagtttc 5491
Query: 3248 attcacagtcatgggaaactgaggcttgtgatagcctcgaaatgaagttacaatgttttg 3307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5492 attcacagtcatgggaaactgaggcttgtgatagcctcgaaatgaagttacaatgttttg 5551
Query: 3308 gattttgaccggaaaggttgtgcagaggtgagaaaaagccaagccattcttttgtttacc 3367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5552 gattttgaccggaaaggttgtgcagaggtgagaaaaagccaagccattcttttgtttacc 5611
Query: 3368 aagtgaggtgatataacatttttctggggtttttcttttaattcagccaataaaacgtag 3427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5612 aagtgaggtgatataacatttttctggggtttttcttttaattcagccaataaaacgtag 5671
Query: 3428 gaaattttggacataattttttcttttatggttcttcatgtttaaacattagttttcacg 3487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5672 gaaattttggacataattttttcttttatggttcttcatgtttaaacattagttttcacg 5731
Query: 3488 taatttacttgcgtatttc 3506
|||||||||||||||||||
Sbjct: 5732 taatttacttgcgtatttc 5750
Score = 731 bits (369), Expect = 0.0
Identities = 369/369 (100%)
Strand = Plus / Plus
Query: 1 atgatagtaagagcccttaagcatatcctccaggcggtgatttctgctgttgctactgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 atgatagtaagagcccttaagcatatcctccaggcggtgatttctgctgttgctactgac 2280
Query: 61 actgacaaaatagctataaaagtagctgctgctttgaacatgatgcttgggattcctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 actgacaaaatagctataaaagtagctgctgctttgaacatgatgcttgggattcctgaa 2340
Query: 121 aatgttgcagcaacaccacataacccttggaatgtacatcctctgatcttccgatggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 aatgttgcagcaacaccacataacccttggaatgtacatcctctgatcttccgatggttg 2400
Query: 181 gagaaattcttgaagaaacggtatgattatgatcttaatgccttcagttacaaggatcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 gagaaattcttgaagaaacggtatgattatgatcttaatgccttcagttacaaggatcta 2460
Query: 241 cggaagtttgccattctccgaggcttatgccataaggttggtattgagttgattccaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 cggaagtttgccattctccgaggcttatgccataaggttggtattgagttgattccaagg 2520
Query: 301 gactttgacatggattctcctgcacctttccggaaaacagatgtggttagtcttgtccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 gactttgacatggattctcctgcacctttccggaaaacagatgtggttagtcttgtccca 2580
Query: 361 gtgcataag 369
|||||||||
Sbjct: 2581 gtgcataag 2589
>At4g28080.1 68417.m04027 expressed protein
Length = 5813
Score = 159 bits (80), Expect = 2e-37
Identities = 263/324 (81%)
Strand = Plus / Plus
Query: 487 gtagcagtttgcggtccctatcacagaatgacagccggagcttacagtttacttgctgtg 546
||||| || ||||| || ||||| |||||||| || ||||| || ||| | || |||||
Sbjct: 2730 gtagctgtgtgcggcccatatcatagaatgaccgctggagcgtatagtcttctcgctgtt 2789
Query: 547 gttctatatcacactggtgactttaaccaggctacaatatatcagcaaaaggctttagac 606
|| || || || ||||| || |||||||||||||| || |||||||| || || | |||
Sbjct: 2790 gtgctgtaccatactggggattttaaccaggctaccatttatcagcagaaagcactcgac 2849
Query: 607 atcaatgagagggaacttggacttgatcatccagatacaatgaagagttatggtgatctt 666
|| ||||| |||||||||||||||||||| ||||| |||||||| || || || || ||
Sbjct: 2850 ataaatgaaagggaacttggacttgatcacccagacacaatgaaaagctacggcgacctg 2909
Query: 667 gctgtcttctattataggcttcagcatacagagctggctctcaagtatgttaagcgtgcg 726
||||||||||||||| | |||||||| |||||| | || | |||||||| || |||||
Sbjct: 2910 gctgtcttctattatcgtcttcagcacacagagttagccttgaagtatgtcaaccgtgcc 2969
Query: 727 ttgtatctcttacatctcacatgcggtccatctcatccaaatactgctgctacatacatc 786
|||||||| || ||||| ||||| || ||||| ||||||||||| ||||| || || ||
Sbjct: 2970 ttgtatcttttgcatctaacatgtggaccatcacatccaaatacagctgccacttatata 3029
Query: 787 aatgtagccatgatggaggaaggt 810
|| ||||| |||||||| ||||||
Sbjct: 3030 aacgtagcaatgatggaagaaggt 3053
Score = 129 bits (65), Expect = 2e-28
Identities = 209/257 (81%)
Strand = Plus / Plus
Query: 886 catatccagactgctgcaagctaccatgccatagcaattgcgctctccttgatggaggca 945
|||||||||||||||||||||||||||||||| || ||||| || || ||||||| |||
Sbjct: 3129 catatccagactgctgcaagctaccatgccattgctattgctctttctctgatggacgca 3188
Query: 946 taccatttaagtgttcagcatgagcaaacaaccttaagaatccttcgagcaaagctgggg 1005
||| || || ||||| |||||||| || || || || || | |||||| || ||
Sbjct: 3189 tactccttgagcgttcaacatgagcagaccactctacagattctacaagcaaaactaggc 3248
Query: 1006 ccagatgatttacgtactcaggatgctgctgcttggctagaatactttgagtccaaggct 1065
|| || ||| | || || |||||||| ||||| ||||| ||||| || |||||||| |||
Sbjct: 3249 cctgaggatcttcggacacaggatgcggctgcgtggcttgaatatttcgagtccaaagct 3308
Query: 1066 tttgaacaacaagaagctgcgcgaaatggtactcctaagccagacgcgtctatagccagc 1125
| ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 3309 ctggaacagcaagaagctgcacgaaatggtactcccaagccagacgcctctatttccagc 3368
Query: 1126 aaaggccacctaagtgt 1142
|||||||| || |||||
Sbjct: 3369 aaaggccatctcagtgt 3385
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing protein ESTs
gb|F20110 and gb|F20109 come from this gene; contains
Pfam profile PF00515: TPR Domain
Length = 4958
Score = 99.6 bits (50), Expect = 2e-19
Identities = 203/254 (79%)
Strand = Plus / Plus
Query: 550 ctatatcacactggtgactttaaccaggctacaatatatcagcaaaaggctttagacatc 609
||||| |||||||| || ||||||||||| |||||||||||||| |||||| |||| ||
Sbjct: 2548 ctataccacactggcgattttaaccaggcaacaatatatcagcagaaggctctagatata 2607
Query: 610 aatgagagggaacttggacttgatcatccagatacaatgaagagttatggtgatcttgct 669
|||||||| |||||||| || || ||||| || || ||||| || ||||| |||||| ||
Sbjct: 2608 aatgagagagaacttggtctcgaccatcccgacactatgaaaagctatggggatctttct 2667
Query: 670 gtcttctattataggcttcagcatacagagctggctctcaagtatgttaagcgtgcgttg 729
|| || || ||| | ||||| ||| || |||| || || ||||| || || ||||||
Sbjct: 2668 gtattttactatcgtcttcaacattttgaattggcactaaaatatgtgaaccgggcgttg 2727
Query: 730 tatctcttacatctcacatgcggtccatctcatccaaatactgctgctacatacatcaat 789
| ||| | || |||| || || | |||||| |||||||||||||| ||||| ||||||
Sbjct: 2728 tttcttcttcacttcacttgtgggctatctcacccaaatactgctgccacatatatcaat 2787
Query: 790 gtagccatgatgga 803
|| || ||||||||
Sbjct: 2788 gtggctatgatgga 2801
Score = 44.1 bits (22), Expect = 0.008
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1018 cgtactcaggatgctgctgcttggctagaatactttga 1055
||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 3016 cgtacacaggatgctgctgcatggctcgaatattttga 3053
Score = 42.1 bits (21), Expect = 0.032
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 1123 agcaaaggccacctaagtgtttccgatctactcgactatat 1163
|||||||||||||| ||||| || ||||| || ||||||||
Sbjct: 3121 agcaaaggccaccttagtgtatcagatctcctggactatat 3161
>At3g51750.2 68416.m05675 expressed protein
Length = 560
Score = 42.1 bits (21), Expect = 0.032
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 3504 ttcacaaaaaaaaaaaaaaaa 3524
|||||||||||||||||||||
Sbjct: 449 ttcacaaaaaaaaaaaaaaaa 429
>At3g51750.1 68416.m05674 expressed protein
Length = 563
Score = 42.1 bits (21), Expect = 0.032
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 3504 ttcacaaaaaaaaaaaaaaaa 3524
|||||||||||||||||||||
Sbjct: 452 ttcacaaaaaaaaaaaaaaaa 432
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 130,586
Number of Sequences: 29161
Number of extensions: 130586
Number of successful extensions: 5336
Number of sequences better than 10.0: 228
length of query: 3524
length of database: 44,058,232
effective HSP length: 19
effective length of query: 3505
effective length of database: 43,504,173
effective search space: 152482126365
effective search space used: 152482126365
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)