BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.17.C1
(3849 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01220.1 68414.m00036 GHMP kinase-related contains simil... 6264 0.0
At1g01225.1 68414.m00037 NC domain-containing protein-relat... 1110 0.0
At4g00905.1 68417.m00123 expressed protein 198 3e-49
At5g06370.1 68418.m00713 NC domain-containing protein conta... 60 1e-07
At4g03160.1 68417.m00431 hypothetical protein 58 6e-07
>At1g01220.1 68414.m00036 GHMP kinase-related contains similarity to L-fucose
kinase [Homo sapiens] gi|21212956|emb|CAD29647
Length = 3168
Score = 6264 bits (3160), Expect = 0.0
Identities = 3160/3160 (100%)
Strand = Plus / Plus
Query: 1 atgtctaagcagaggaagaaagctgacttagccaccgttttgcgcaagtcatggtaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtctaagcagaggaagaaagctgacttagccaccgttttgcgcaagtcatggtaccac 60
Query: 61 ttaaggctctcggtgcgccatcccactcgggtcccgacttgggatgcgattgtgctcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaaggctctcggtgcgccatcccactcgggtcccgacttgggatgcgattgtgctcaca 120
Query: 121 gcggctagtcctgaacaagcggagctctacgactggcagctccggcgagcgaaacgtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggctagtcctgaacaagcggagctctacgactggcagctccggcgagcgaaacgtatg 180
Query: 181 ggacgaatagctagctccactgtcactttggccgttcctgatccagatggcaaacggatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggacgaatagctagctccactgtcactttggccgttcctgatccagatggcaaacggatc 240
Query: 241 gggtctggtgctgctactctcaacgccatttatgctctcgctcgtcattatgagaaattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggtctggtgctgctactctcaacgccatttatgctctcgctcgtcattatgagaaattg 300
Query: 301 ggttttgatcttggtcccgagatggaagttgcgaatggtgcttgcaaatgggttagattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggttttgatcttggtcccgagatggaagttgcgaatggtgcttgcaaatgggttagattc 360
Query: 361 atctctgcaaagcatgtattgatgcttcatgctggaggtgactccaaaagggttccatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atctctgcaaagcatgtattgatgcttcatgctggaggtgactccaaaagggttccatgg 420
Query: 421 gcaaatcctatgggcaaagtattcctcccacttccttatcttgcagctgatgaccctgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcaaatcctatgggcaaagtattcctcccacttccttatcttgcagctgatgaccctgat 480
Query: 481 ggtcctgttcctctcctttttgatcatattcttgctatcgcttcatgtgcaagacaagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtcctgttcctctcctttttgatcatattcttgctatcgcttcatgtgcaagacaagct 540
Query: 541 ttccaagaccaaggtggattatttattatgactggagacgtccttccttgttttgatgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttccaagaccaaggtggattatttattatgactggagacgtccttccttgttttgatgct 600
Query: 601 tttaaaatgactctccctgaagacgcagcttccatagttactgtgcctattactctcgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttaaaatgactctccctgaagacgcagcttccatagttactgtgcctattactctcgat 660
Query: 661 attgcctccaaccatggtgttattgtcacatcaaaatctgagtcacttgctgaaagctat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attgcctccaaccatggtgttattgtcacatcaaaatctgagtcacttgctgaaagctat 720
Query: 721 acagttagtttagtcaatgatcttctgcagaagcctacagtagaggatcttgtcaagaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acagttagtttagtcaatgatcttctgcagaagcctacagtagaggatcttgtcaagaaa 780
Query: 781 gatgcaattttacatgatggacggacactccttgacactgggataatatctgctaggggc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gatgcaattttacatgatggacggacactccttgacactgggataatatctgctaggggc 840
Query: 841 agagcatggtcggacctggtcgctcttggatgctcgtgccaacccatgatcttagagctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agagcatggtcggacctggtcgctcttggatgctcgtgccaacccatgatcttagagctt 900
Query: 901 ataggtagtaagaaagagatgagtttgtatgaagatttggtggctgcttgggttccttca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ataggtagtaagaaagagatgagtttgtatgaagatttggtggctgcttgggttccttca 960
Query: 961 aggcatgattggctgcgaaccagacctttgggtgaacttcttgttaacagtctggggagg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aggcatgattggctgcgaaccagacctttgggtgaacttcttgttaacagtctggggagg 1020
Query: 1021 caaaagatgtacagctactgcacctatgatttgcagtttttgcattttggaacatcaagt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 caaaagatgtacagctactgcacctatgatttgcagtttttgcattttggaacatcaagt 1080
Query: 1081 gaggtattggatcatttaagcggggatgcttcaggaattgttggtcggagacacttatgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gaggtattggatcatttaagcggggatgcttcaggaattgttggtcggagacacttatgt 1140
Query: 1141 tccatccctgcaactacggtttctgatattgcagcatcttccgttattttgtctagtgaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tccatccctgcaactacggtttctgatattgcagcatcttccgttattttgtctagtgaa 1200
Query: 1201 attgcacctggtgtctccattggtgaagattcacttatatatgattcaacagtttctggt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 attgcacctggtgtctccattggtgaagattcacttatatatgattcaacagtttctggt 1260
Query: 1261 gctgtacaaattggttctcagtccatagttgttggtattcacatcccgagcgaagatctt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gctgtacaaattggttctcagtccatagttgttggtattcacatcccgagcgaagatctt 1320
Query: 1321 ggaactccagagagtttcaggttcatgcttcctgataggcattgtctttgggaggtccca 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ggaactccagagagtttcaggttcatgcttcctgataggcattgtctttgggaggtccca 1380
Query: 1381 ctagtgggacataagggaagagtgattgtgtattgtggtctccatgacaatccaaagaac 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctagtgggacataagggaagagtgattgtgtattgtggtctccatgacaatccaaagaac 1440
Query: 1441 tcaattcataaagatggaactttttgcggtaaacccttggagaaggtattgtttgatctt 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tcaattcataaagatggaactttttgcggtaaacccttggagaaggtattgtttgatctt 1500
Query: 1501 ggcattgaggaaagcgacctctggagctcgtatgttgcacaagatagatgtttgtggaat 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ggcattgaggaaagcgacctctggagctcgtatgttgcacaagatagatgtttgtggaat 1560
Query: 1561 gcaaaactgttcccgattcttacgtatagtgaaatgctgaagttagcgtcgtggttgatg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gcaaaactgttcccgattcttacgtatagtgaaatgctgaagttagcgtcgtggttgatg 1620
Query: 1621 ggtttagatgatagtagaaacaaggagaagattaagttgtggagaagctcacaacgtgta 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ggtttagatgatagtagaaacaaggagaagattaagttgtggagaagctcacaacgtgta 1680
Query: 1681 agcttagaagagttgcatggatcaatcaactttcctgagatgtgcaatggttccagcaat 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 agcttagaagagttgcatggatcaatcaactttcctgagatgtgcaatggttccagcaat 1740
Query: 1741 catcaagctgatcttgcgggtggaatcgctaaagcatgtatgaactatggtatgcttggg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 catcaagctgatcttgcgggtggaatcgctaaagcatgtatgaactatggtatgcttggg 1800
Query: 1801 cgtaatttgtctcagctgtgccatgagattttacagaaagagtcattaggattggaaata 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 cgtaatttgtctcagctgtgccatgagattttacagaaagagtcattaggattggaaata 1860
Query: 1861 tgcaagaattttctggatcaatgtcccaaatttcaggagcagaactccaaaattcttcca 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 tgcaagaattttctggatcaatgtcccaaatttcaggagcagaactccaaaattcttcca 1920
Query: 1921 aagagtcgagcataccaggtagaagttgatcttcttcgagcatgtggggatgaagcaaaa 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 aagagtcgagcataccaggtagaagttgatcttcttcgagcatgtggggatgaagcaaaa 1980
Query: 1981 gctatagagttggagcataaagtatggggagcagttgcagaagaaactgcttcagctgtg 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 gctatagagttggagcataaagtatggggagcagttgcagaagaaactgcttcagctgtg 2040
Query: 2041 agatatggttttagagaacatctgttggaatcaagtggcaagtctcattctgagaatcat 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 agatatggttttagagaacatctgttggaatcaagtggcaagtctcattctgagaatcat 2100
Query: 2101 atttctcatccggatcgagtttttcaaccaagaaggacaaaagttgaactaccagttcgg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 atttctcatccggatcgagtttttcaaccaagaaggacaaaagttgaactaccagttcgg 2160
Query: 2161 gtagattttgtaggaggttggagtgatacacctccatggagcttagagcgtgcaggttac 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 gtagattttgtaggaggttggagtgatacacctccatggagcttagagcgtgcaggttac 2220
Query: 2221 gtcctgaacatggctataaccttagaaggttcacttccaattggcacaatcattgaaaca 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 gtcctgaacatggctataaccttagaaggttcacttccaattggcacaatcattgaaaca 2280
Query: 2281 acaaatcagatgggaatctcaatccaagacgacgctggaaacgagctacacatcgaagat 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 acaaatcagatgggaatctcaatccaagacgacgctggaaacgagctacacatcgaagat 2340
Query: 2341 ccaataagcattaagacaccatttgaagtcaatgatccattcaggcttgttaaatctgct 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 ccaataagcattaagacaccatttgaagtcaatgatccattcaggcttgttaaatctgct 2400
Query: 2401 ctattggtaaccggcattgtccaagaaaattttgttgactccacagggttagcaataaag 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 ctattggtaaccggcattgtccaagaaaattttgttgactccacagggttagcaataaag 2460
Query: 2461 acatgggccaatgttcctcgtggcagtggtctaggaacctcgagcattctagctgcagct 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 acatgggccaatgttcctcgtggcagtggtctaggaacctcgagcattctagctgcagct 2520
Query: 2521 gttgtgaaaggacttctccagatatctaatggagatgaaagcaatgaaaacattgcaaga 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 gttgtgaaaggacttctccagatatctaatggagatgaaagcaatgaaaacattgcaaga 2580
Query: 2581 cttgtcttggttctggagcaactcatgggtacaggaggtggctggcaagatcagattggt 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 cttgtcttggttctggagcaactcatgggtacaggaggtggctggcaagatcagattggt 2640
Query: 2641 ggattatatccaggaatcaaattcacttcaagttttccaggaatccctatgcgtcttcaa 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 ggattatatccaggaatcaaattcacttcaagttttccaggaatccctatgcgtcttcaa 2700
Query: 2701 gttgttcctttactcgcctcgccacagctaatttcagagttggagcaacgcctccttgtt 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gttgttcctttactcgcctcgccacagctaatttcagagttggagcaacgcctccttgtt 2760
Query: 2761 gttttcacgggtcaagtcaggctagctcatcaagtcctacacaaggtcgttacaaggtat 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 gttttcacgggtcaagtcaggctagctcatcaagtcctacacaaggtcgttacaaggtat 2820
Query: 2821 ttgcaaagagataatctcctaatttcaagcattaagcgattgacggagctggcgaaatcc 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 ttgcaaagagataatctcctaatttcaagcattaagcgattgacggagctggcgaaatcc 2880
Query: 2881 ggtagagaagcgttgatgaactgtgaagttgacgaggtaggcgacataatgtcagaagct 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 ggtagagaagcgttgatgaactgtgaagttgacgaggtaggcgacataatgtcagaagct 2940
Query: 2941 tggagactgcatcaagagctggatccgtattgcagcaatgagtttgtggataagcttttt 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 tggagactgcatcaagagctggatccgtattgcagcaatgagtttgtggataagcttttt 3000
Query: 3001 gagttttcgcaaccttatagctcaggattcaagctggtaggtgcaggtggtggtggattc 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 gagttttcgcaaccttatagctcaggattcaagctggtaggtgcaggtggtggtggattc 3060
Query: 3061 tcacttatattggctaaggacgcagagaaagccaaggagttaagacagagattggaagaa 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 tcacttatattggctaaggacgcagagaaagccaaggagttaagacagagattggaagaa 3120
Query: 3121 catgcagagtttgatgtcaaagtttacaactggagcatct 3160
||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 catgcagagtttgatgtcaaagtttacaactggagcatct 3160
>At1g01225.1 68414.m00037 NC domain-containing protein-related contains weak hit
to Pfam profile PF04970: NC domain
Length = 1025
Score = 1110 bits (560), Expect = 0.0
Identities = 560/560 (100%)
Strand = Plus / Plus
Query: 3290 gacaaccggacagtggagtagtcctttcttgcttagactgtttcctcaagaacggctcac 3349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacaaccggacagtggagtagtcctttcttgcttagactgtttcctcaagaacggctcac 360
Query: 3350 tctactgcttcgaatatggagtcagtccatcggttttcctaaccaaagtccgcggaggga 3409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctactgcttcgaatatggagtcagtccatcggttttcctaaccaaagtccgcggaggga 420
Query: 3410 cttgcacaaccgcgcaatctgatacaactgattcagtcatccacagggcaatgtaccttc 3469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttgcacaaccgcgcaatctgatacaactgattcagtcatccacagggcaatgtaccttc 480
Query: 3470 tccaaaacggatttggcaactacgacattttcaagaacaactgtgaggatttcgcgctct 3529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccaaaacggatttggcaactacgacattttcaagaacaactgtgaggatttcgcgctct 540
Query: 3530 attgcaagaccggtttgcttataatggataagctcggtgtagggagaagcggtcaagctt 3589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attgcaagaccggtttgcttataatggataagctcggtgtagggagaagcggtcaagctt 600
Query: 3590 cttcaattgttggtgctcctttggctgcactcctctcttctcctttcaaattgcttattc 3649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttcaattgttggtgctcctttggctgcactcctctcttctcctttcaaattgcttattc 660
Query: 3650 caagtcccattggtgtggcaacagttactgctggtatgtactgtatgagtcgctatgcta 3709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caagtcccattggtgtggcaacagttactgctggtatgtactgtatgagtcgctatgcta 720
Query: 3710 ccgatattggtgttagaagcgacgtcattaaggtctcagttgaggatttggctctcaacc 3769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccgatattggtgttagaagcgacgtcattaaggtctcagttgaggatttggctctcaacc 780
Query: 3770 ttgacgtaaagaccattgagcaaggtgaagaagaagaagaagacgaagaagaagattctg 3829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttgacgtaaagaccattgagcaaggtgaagaagaagaagaagacgaagaagaagattctg 840
Query: 3830 ataccgactatgttaggtga 3849
||||||||||||||||||||
Sbjct: 841 ataccgactatgttaggtga 860
>At4g00905.1 68417.m00123 expressed protein
Length = 845
Score = 198 bits (100), Expect = 3e-49
Identities = 379/472 (80%)
Strand = Plus / Plus
Query: 3301 agtggagtagtcctttcttgcttagactgtttcctcaagaacggctcactctactgcttc 3360
||||||||||| ||||||||| ||||||| || |||||||| || || |||||| | ||
Sbjct: 265 agtggagtagtactttcttgcctagactgctttctcaagaaaggttctctctaccgtttt 324
Query: 3361 gaatatggagtcagtccatcggttttcctaaccaaagtccgcggagggacttgcacaacc 3420
|| ||||||||||| ||||| ||||||| |||| | ||||||| || || ||||||||
Sbjct: 325 gattatggagtcagctcatcgattttcctcaccagattccgcggtggcacgtgcacaact 384
Query: 3421 gcgcaatctgatacaactgattcagtcatccacagggcaatgtaccttctccaaaacgga 3480
|| | |||||| | | | |||||||||| || |||||| |||||||||||||||||
Sbjct: 385 gctccatctgacccgcttcaaacagtcatccatagagcaatgcaccttctccaaaacgga 444
Query: 3481 tttggcaactacgacattttcaagaacaactgtgaggatttcgcgctctattgcaagacc 3540
||||| |||||| | | ||| |||| ||||| || ||||| || ||||| ||||||||
Sbjct: 445 tttggtaactacaatgtcttccagaataactgcgaagattttgctctctactgcaagaca 504
Query: 3541 ggtttgcttataatggataagctcggtgtagggagaagcggtcaagcttcttcaattgtt 3600
|| ||||| || |||||||| ||| || |||||||| |||||||| ||| || |
Sbjct: 505 ggattgctcattctggataagaacggggttgggagaagtggtcaagccagttctatcata 564
Query: 3601 ggtgctcctttggctgcactcctctcttctcctttcaaattgcttattccaagtcccatt 3660
||||||||| | |||||||| ||||| || ||| ||| |||| | ||||||| ||| ||
Sbjct: 565 ggtgctcctctagctgcactactctcgtcacctctcacattgttgattccaaatcctgtt 624
Query: 3661 ggtgtggcaacagttactgctggtatgtactgtatgagtcgctatgctaccgatattggt 3720
||||| ||||| || |||||||| ||||| ||||||||| | |||||||| ||||| |||
Sbjct: 625 ggtgtagcaactgtcactgctgggatgtattgtatgagtaggtatgctactgatatcggt 684
Query: 3721 gttagaagcgacgtcattaaggtctcagttgaggatttggctctcaaccttg 3772
||||||| ||| || || ||||| | ||||||||||| ||||| |||||||
Sbjct: 685 gttagaaacgatgtgatcaaggttcctgttgaggatttagctctgaaccttg 736
Score = 40.1 bits (20), Expect = 0.14
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 3805 gaagaagacgaagaagaaga 3824
||||||||||||||||||||
Sbjct: 191 gaagaagacgaagaagaaga 172
Score = 36.2 bits (18), Expect = 2.1
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 3799 gaagaagaagaagacgaagaagaaga 3824
|||||||| ||||| |||||||||||
Sbjct: 191 gaagaagacgaagaagaagaagaaga 166
Score = 34.2 bits (17), Expect = 8.5
Identities = 23/25 (92%)
Strand = Plus / Minus
Query: 3796 gaagaagaagaagaagacgaagaag 3820
||||| ||||||||||| |||||||
Sbjct: 188 gaagacgaagaagaagaagaagaag 164
Score = 34.2 bits (17), Expect = 8.5
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 3796 gaagaagaagaagaaga 3812
|||||||||||||||||
Sbjct: 182 gaagaagaagaagaaga 166
>At5g06370.1 68418.m00713 NC domain-containing protein contains Pfam domain,
PF04970: NC domain
Length = 1081
Score = 60.0 bits (30), Expect = 1e-07
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 3472 caaaacggatttggcaactacgacattttcaagaacaactgtgaggatttcgcgctctat 3531
|||||||||||||| || ||| |||||||||||||||||||||||||||| | |||
Sbjct: 556 caaaacggatttggatgttatgacgttttcaagaacaactgtgaggatttcgctatatat 615
Query: 3532 tgcaagaccg 3541
||||| ||||
Sbjct: 616 tgcaaaaccg 625
>At4g03160.1 68417.m00431 hypothetical protein
Length = 579
Score = 58.0 bits (29), Expect = 6e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 3796 gaagaagaagaagaagacgaagaagaaga 3824
|||||||||||||||||||||||||||||
Sbjct: 79 gaagaagaagaagaagacgaagaagaaga 107
Score = 40.1 bits (20), Expect = 0.14
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3797 aagaagaagaagaagacgaagaagaaga 3824
|||||||||||||||| || ||||||||
Sbjct: 77 aagaagaagaagaagaagacgaagaaga 104
Score = 38.2 bits (19), Expect = 0.54
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 3796 gaagaagaagaagaagacgaagaagaa 3822
|||||||||||||| || |||||||||
Sbjct: 82 gaagaagaagaagacgaagaagaagaa 108
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 153,813
Number of Sequences: 29161
Number of extensions: 153813
Number of successful extensions: 12951
Number of sequences better than 10.0: 1412
length of query: 3849
length of database: 44,058,232
effective HSP length: 19
effective length of query: 3830
effective length of database: 43,504,173
effective search space: 166620982590
effective search space used: 166620982590
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)