BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.43.cl.4367.Contig1
(3193 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38550.1 68417.m05458 expressed protein 1883 0.0
At2g20950.4 68415.m02474 expressed protein 141 4e-32
At2g20950.3 68415.m02473 expressed protein 141 4e-32
At2g20950.2 68415.m02472 expressed protein 141 4e-32
At2g20950.1 68415.m02471 expressed protein 141 4e-32
>At4g38550.1 68417.m05458 expressed protein
Length = 2227
Score = 1883 bits (950), Expect = 0.0
Identities = 985/994 (99%), Gaps = 2/994 (0%)
Strand = Plus / Minus
Query: 13 gtaaaatgcacttacataaatatatagcttgaaacacacgcatgcatattattacaatgt 72
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2227 gtaaaatgcacatacataaatatatagcttgaaacacacgcatgcatattattacaatgt 2168
Query: 73 attgagatgcttgactctgaaacaatctacgcttctgcaatagctgaccttgactctcaa 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2167 attgagatgcttgactctgaaacaatctacgcttctgcaatagctgaccttgactctcaa 2108
Query: 133 cattcaacataaaagctttttaaatctttttaagaattacactaatggccccaaacttta 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2107 cattcaacataaaagctttttaaatctttttaagaattacactaatggccccaaacttta 2048
Query: 193 aatttataaacatttcatgtcaatagaaaataattgtataatgagatccaaaacggaaga 252
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2047 aatttataaacatttcatgtcaatagaaaataattgaataatgagatccaaaacggaaga 1988
Query: 253 aattggagacggagctaaaggctccagaaggacggcttctccttggaatttgtggactaa 312
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 1987 aattggagacggagctaaagg-tggagaaggacggcttctccttggaatttgtggacttt 1929
Query: 313 ggactggaagaggtcgagattcttgttcaatttcgaacctttcatctccagctgccctag 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1928 ggactggaagaggtcgagattcttgttcaatttcgaacctttcatctccagctgccctag 1869
Query: 373 cctccctgcgaccaccgtcaccttctctct-cattctttgatttccttctccctcttcac 431
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1868 cctccctgcgaccaccgtcaccttctctctgcattctttgatttccttctccctcttcac 1809
Query: 432 cagctccgccgtcatctcctccatctccccctttttcgccgtcagatctctctcgcacac 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 cagctccgccgtcatctcctccatctccccctttttcgccgtcagatctctctcgcacac 1749
Query: 492 ctctttctccaccttcgccgtgtcgtactgcccgaaatactccaccgcctccgccagttc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1748 ctctttctccaccttcgccgtgtcgtactgcccgaaatactccaccgcctccgccagttc 1689
Query: 552 cgttaccgctgtctttagccacgacacgttgattttcaccgactccatgtctttcaccac 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1688 cgttaccgctgtctttagccacgacacgttgattttcaccgactccatgtctttcaccac 1629
Query: 612 cgccgcgatctccgccacgcgcgtttttgtcaaatccctcagaaccgtctttttcagctc 671
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1628 cgccgcgatctccgccacgcgcgttttcgtcaaatccctcagaaccgtctttttcagctc 1569
Query: 672 catcaccacagcggctagggattccaggtaataagaccgagttgccattgcttgcagctt 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 catcaccacagcggctagggattccaggtaataagaccgagttgccattgcttgcagctt 1509
Query: 732 cgaggaggctgcgatgtcgccgtgcttgtcgatgatcgcctgcagggtttccgacacgct 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 cgaggaggctgcgatgtcgccgtgcttgtcgatgatcgcctgcagggtttccgacacgct 1449
Query: 792 ctgcctcactctgtaattcgcgacggatacgtaagcctcggatatcattgattgactctc 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 ctgcctcactctgtaattcgcgacggatacgtaagcctcggatatcattgattgactctc 1389
Query: 852 ttccttgccgctttcgtagttcttgagtcctcgcattttggtaatctcctgcattgtgaa 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 ttccttgccgctttcgtagttcttgagtcctcgcattttggtaatctcctgcattgtgaa 1329
Query: 912 gctttgtgactcgtcaggcagctccggcggctcgaactgcttgtcttgctcataggtctc 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 gctttgtgactcgtcaggcagctccggcggctcgaactgcttgtcttgctcataggtctc 1269
Query: 972 ggccgcaactatctggtagttgtggtgaacaggc 1005
||||||||||||||||||||||||||||||||||
Sbjct: 1268 ggccgcaactatctggtagttgtggtgaacaggc 1235
Score = 440 bits (222), Expect = e-122
Identities = 222/222 (100%)
Strand = Plus / Minus
Query: 2514 cgtgccgtatccatacacgggaggcctagggtgggagttggggacgcgttcagaggcagg 2573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cgtgccgtatccatacacgggaggcctagggtgggagttggggacgcgttcagaggcagg 345
Query: 2574 ctgtttccagtatggtctttgttcattggacatggggaaatcgtactctgtttcggctct 2633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctgtttccagtatggtctttgttcattggacatggggaaatcgtactctgtttcggctct 285
Query: 2634 tttgtttgaaagatacgatgggggcggggatctagcgccggggggatgagcagggctgcc 2693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tttgtttgaaagatacgatgggggcggggatctagcgccggggggatgagcagggctgcc 225
Query: 2694 cggagtgctcttgctgacagttttcttgccaaagagtcctga 2735
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 cggagtgctcttgctgacagttttcttgccaaagagtcctga 183
Score = 412 bits (208), Expect = e-114
Identities = 208/208 (100%)
Strand = Plus / Minus
Query: 1105 cgtgctgttctcggatacgatcctggaacgaagtgggctgcggatttctggatagaggta 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 cgtgctgttctcggatacgatcctggaacgaagtgggctgcggatttctggatagaggta 1176
Query: 1165 ggtggagtgattatcgtcgtcgctggatgaatagtatggtccatgaacgggactcggagg 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 ggtggagtgattatcgtcgtcgctggatgaatagtatggtccatgaacgggactcggagg 1116
Query: 1225 agcgctcttctggtgtattaagtcgccatctagctcatacattgcctcgaaatcctcgtt 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 agcgctcttctggtgtattaagtcgccatctagctcatacattgcctcgaaatcctcgtt 1056
Query: 1285 atcctggtggcttctacgatggtcaggc 1312
||||||||||||||||||||||||||||
Sbjct: 1055 atcctggtggcttctacgatggtcaggc 1028
Score = 293 bits (148), Expect = 5e-78
Identities = 148/148 (100%)
Strand = Plus / Minus
Query: 1428 cgttctgtatggttgtggtggtggtggtgaatggcttgctgctggatgcaatgggctagg 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 cgttctgtatggttgtggtggtggtggtgaatggcttgctgctggatgcaatgggctagg 969
Query: 1488 tggagagctgtttcgtggtgttacatcgtcatcttgctcataaaagtcctcaatttgctc 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 tggagagctgtttcgtggtgttacatcgtcatcttgctcataaaagtcctcaatttgctc 909
Query: 1548 tttaccatggttactacgttgatcagac 1575
||||||||||||||||||||||||||||
Sbjct: 908 tttaccatggttactacgttgatcagac 881
Score = 258 bits (130), Expect = 3e-67
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 2096 cgtgtggaatggagatggagaagggcttctgaatgggtgaaatgggctcgcattgcttcg 2155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 cgtgtggaatggagatggagaagggcttctgaatgggtgaaatgggctcgcattgcttcg 579
Query: 2156 ggtatctgcttcatacattcgatcctggtgttctcgacgatactcggttgatttcctagg 2215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ggtatctgcttcatacattcgatcctggtgttctcgacgatactcggttgatttcctagg 519
Query: 2216 acgttcaggc 2225
||||||||||
Sbjct: 518 acgttcaggc 509
Score = 246 bits (124), Expect = 1e-63
Identities = 124/124 (100%)
Strand = Plus / Minus
Query: 1880 cgttctgtatggtggtggagagcggcttccagctggatggaatgggctccctggagcgct 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 cgttctgtatggtggtggagagcggcttccagctggatggaatgggctccctggagcgct 702
Query: 1940 attctgcagcatggtgttggcctcaggctcatacatgtcgtagtggtctctgcggcgatc 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 attctgcagcatggtgttggcctcaggctcatacatgtcgtagtggtctctgcggcgatc 642
Query: 2000 aggc 2003
||||
Sbjct: 641 aggc 638
Score = 240 bits (121), Expect = 6e-62
Identities = 121/121 (100%)
Strand = Plus / Minus
Query: 1686 cgttttgtatgctgctggatgaaacgggctcggtggagagctgtttcgcggtgtgacatc 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 cgttttgtatgctgctggatgaaacgggctcggtggagagctgtttcgcggtgtgacatc 822
Query: 1746 accatcttgctcgtacaggtcctcaaattgctctttatcatagttactacgacgatcagg 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 accatcttgctcgtacaggtcctcaaattgctctttatcatagttactacgacgatcagg 762
Query: 1806 c 1806
|
Sbjct: 761 c 761
Score = 210 bits (106), Expect = 5e-53
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 2305 cgtgcggtttccagctggatgatatgggctggaaggagcgttggtctctggctcataact 2364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cgtgcggtttccagctggatgatatgggctggaaggagcgttggtctctggctcataact 450
Query: 2365 catggcctccattctttctctaccgtggtctcgacgatggtcgggc 2410
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 catggcctccattctttctctaccgtggtctcgacgatggtcgggc 404
Score = 194 bits (98), Expect = 3e-48
Identities = 98/98 (100%)
Strand = Plus / Minus
Query: 3057 cttgctgctggaggatctaaagttgccggagaagactttttggttcgtttcgtttctgtt 3116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 cttgctgctggaggatctaaagttgccggagaagactttttggttcgtttcgtttctgtt 39
Query: 3117 cttcaacgcgtcatactacgactggtatatatgattcg 3154
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 cttcaacgcgtcatactacgactggtatatatgattcg 1
Score = 180 bits (91), Expect = 5e-44
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 2875 cctgatgattttttgctatctttcttagctttgcttgaagtgaagaagtccatattgggt 2934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cctgatgattttttgctatctttcttagctttgcttgaagtgaagaagtccatattgggt 128
Query: 2935 tgaggcaaaggatgggattgagaaatgatct 2965
|||||||||||||||||||||||||||||||
Sbjct: 127 tgaggcaaaggatgggattgagaaatgatct 97
Score = 99.6 bits (50), Expect = 1e-19
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 1695 tgctgctggatgaaacgggctcggtggagagctgtttcgcggtgtgacatcaccatcttg 1754
|||||||||||| || ||||| ||||||||||||||||| ||||| ||||| |||||||
Sbjct: 992 tgctgctggatgcaatgggctaggtggagagctgtttcgtggtgttacatcgtcatcttg 933
Query: 1755 ctcgtacaggtcctcaaattgctctttatcatagttactacg 1796
||| || | |||||||| |||||||||| ||| |||||||||
Sbjct: 932 ctcataaaagtcctcaatttgctctttaccatggttactacg 891
Score = 99.6 bits (50), Expect = 1e-19
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 1464 tgctgctggatgcaatgggctaggtggagagctgtttcgtggtgttacatcgtcatcttg 1523
|||||||||||| || ||||| ||||||||||||||||| ||||| ||||| |||||||
Sbjct: 872 tgctgctggatgaaacgggctcggtggagagctgtttcgcggtgtgacatcaccatcttg 813
Query: 1524 ctcataaaagtcctcaatttgctctttaccatggttactacg 1565
||| || | |||||||| |||||||||| ||| |||||||||
Sbjct: 812 ctcgtacaggtcctcaaattgctctttatcatagttactacg 771
>At2g20950.4 68415.m02474 expressed protein
Length = 2260
Score = 141 bits (71), Expect = 4e-32
Identities = 333/419 (79%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 353 ttcatctccagctgccctagcctccctgcgaccaccgtcaccttctctct-cattctttg 411
||||||||||||||||| |||| || || | | ||||||| ||||||| ||||| ||
Sbjct: 1594 ttcatctccagctgccccagccgtcccgccaactccgtcactctctctctacattccttc 1535
Query: 412 atttccttctccctcttcaccagctccgccgtcatctcctccatctccccctttttcgcc 471
|||||||||| ||| | ||||||| || |||||||||||||||| || ||||
Sbjct: 1534 gtttccttctctctccgccgcagctcctccctcatctcctccatctcttttttccccgcc 1475
Query: 472 gtcagatctctctcgcacacctctttctccaccttcgccgtgtcgtactgcccgaaatac 531
|||| || || |||||| |||| || | | ||||||||||||||||| |||| | |||
Sbjct: 1474 gtcatttccctatcgcactcctccctcacaatcttcgccgtgtcgtacttcccgtagtac 1415
Query: 532 tccaccgcctccgccagttccgttaccgctgtctttagccacgacacgttgattttcacc 591
|||||||||||||| || ||||| |||||||| || |||||||| || | ||||||||||
Sbjct: 1414 tccaccgcctccgctagctccgtcaccgctgttttgagccacgatacatcgattttcacc 1355
Query: 592 gactccatgtctttcaccaccgccgcgatctccgccacgcgcgtttttgtcaaatccctc 651
|| |||||||| ||||| ||||||||||| |||||||| ||||| || |||| ||| |||
Sbjct: 1354 gaatccatgtccttcacgaccgccgcgatttccgccactcgcgtcttcgtcagatctctc 1295
Query: 652 agaaccgtctttttcagctccatcaccacagcggctagggattccaggtaataagaccga 711
| |||| |||||| ||||| || | |||||||||||||| || ||| | ||||
Sbjct: 1294 aacgccgttgatttcagttccattactgctgcggctagggattcgagataaaacgacctc 1235
Query: 712 gttgccattgcttgcagcttcgaggaggctgcgatgtcgccgtgcttgtcgatgatcgc 770
|||| | | ||| | |||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 1234 gttgaggtagattgtaacttcgacgaggcggcgatgtcaccgtgtttgtcaatgatcgc 1176
Score = 85.7 bits (43), Expect = 2e-15
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 877 agtcctcgcattttggtaatctcctgcattgtgaagctttgtgactcgtcaggcagctcc 936
||||| |||||| ||| ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 1075 agtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactcgtccggcagctcc 1016
Query: 937 ggcggctcgaa 947
|||||||||||
Sbjct: 1015 ggcggctcgaa 1005
>At2g20950.3 68415.m02473 expressed protein
Length = 2185
Score = 141 bits (71), Expect = 4e-32
Identities = 333/419 (79%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 353 ttcatctccagctgccctagcctccctgcgaccaccgtcaccttctctct-cattctttg 411
||||||||||||||||| |||| || || | | ||||||| ||||||| ||||| ||
Sbjct: 1519 ttcatctccagctgccccagccgtcccgccaactccgtcactctctctctacattccttc 1460
Query: 412 atttccttctccctcttcaccagctccgccgtcatctcctccatctccccctttttcgcc 471
|||||||||| ||| | ||||||| || |||||||||||||||| || ||||
Sbjct: 1459 gtttccttctctctccgccgcagctcctccctcatctcctccatctcttttttccccgcc 1400
Query: 472 gtcagatctctctcgcacacctctttctccaccttcgccgtgtcgtactgcccgaaatac 531
|||| || || |||||| |||| || | | ||||||||||||||||| |||| | |||
Sbjct: 1399 gtcatttccctatcgcactcctccctcacaatcttcgccgtgtcgtacttcccgtagtac 1340
Query: 532 tccaccgcctccgccagttccgttaccgctgtctttagccacgacacgttgattttcacc 591
|||||||||||||| || ||||| |||||||| || |||||||| || | ||||||||||
Sbjct: 1339 tccaccgcctccgctagctccgtcaccgctgttttgagccacgatacatcgattttcacc 1280
Query: 592 gactccatgtctttcaccaccgccgcgatctccgccacgcgcgtttttgtcaaatccctc 651
|| |||||||| ||||| ||||||||||| |||||||| ||||| || |||| ||| |||
Sbjct: 1279 gaatccatgtccttcacgaccgccgcgatttccgccactcgcgtcttcgtcagatctctc 1220
Query: 652 agaaccgtctttttcagctccatcaccacagcggctagggattccaggtaataagaccga 711
| |||| |||||| ||||| || | |||||||||||||| || ||| | ||||
Sbjct: 1219 aacgccgttgatttcagttccattactgctgcggctagggattcgagataaaacgacctc 1160
Query: 712 gttgccattgcttgcagcttcgaggaggctgcgatgtcgccgtgcttgtcgatgatcgc 770
|||| | | ||| | |||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 1159 gttgaggtagattgtaacttcgacgaggcggcgatgtcaccgtgtttgtcaatgatcgc 1101
Score = 85.7 bits (43), Expect = 2e-15
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 877 agtcctcgcattttggtaatctcctgcattgtgaagctttgtgactcgtcaggcagctcc 936
||||| |||||| ||| ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 1000 agtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactcgtccggcagctcc 941
Query: 937 ggcggctcgaa 947
|||||||||||
Sbjct: 940 ggcggctcgaa 930
>At2g20950.2 68415.m02472 expressed protein
Length = 2179
Score = 141 bits (71), Expect = 4e-32
Identities = 333/419 (79%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 353 ttcatctccagctgccctagcctccctgcgaccaccgtcaccttctctct-cattctttg 411
||||||||||||||||| |||| || || | | ||||||| ||||||| ||||| ||
Sbjct: 1513 ttcatctccagctgccccagccgtcccgccaactccgtcactctctctctacattccttc 1454
Query: 412 atttccttctccctcttcaccagctccgccgtcatctcctccatctccccctttttcgcc 471
|||||||||| ||| | ||||||| || |||||||||||||||| || ||||
Sbjct: 1453 gtttccttctctctccgccgcagctcctccctcatctcctccatctcttttttccccgcc 1394
Query: 472 gtcagatctctctcgcacacctctttctccaccttcgccgtgtcgtactgcccgaaatac 531
|||| || || |||||| |||| || | | ||||||||||||||||| |||| | |||
Sbjct: 1393 gtcatttccctatcgcactcctccctcacaatcttcgccgtgtcgtacttcccgtagtac 1334
Query: 532 tccaccgcctccgccagttccgttaccgctgtctttagccacgacacgttgattttcacc 591
|||||||||||||| || ||||| |||||||| || |||||||| || | ||||||||||
Sbjct: 1333 tccaccgcctccgctagctccgtcaccgctgttttgagccacgatacatcgattttcacc 1274
Query: 592 gactccatgtctttcaccaccgccgcgatctccgccacgcgcgtttttgtcaaatccctc 651
|| |||||||| ||||| ||||||||||| |||||||| ||||| || |||| ||| |||
Sbjct: 1273 gaatccatgtccttcacgaccgccgcgatttccgccactcgcgtcttcgtcagatctctc 1214
Query: 652 agaaccgtctttttcagctccatcaccacagcggctagggattccaggtaataagaccga 711
| |||| |||||| ||||| || | |||||||||||||| || ||| | ||||
Sbjct: 1213 aacgccgttgatttcagttccattactgctgcggctagggattcgagataaaacgacctc 1154
Query: 712 gttgccattgcttgcagcttcgaggaggctgcgatgtcgccgtgcttgtcgatgatcgc 770
|||| | | ||| | |||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 1153 gttgaggtagattgtaacttcgacgaggcggcgatgtcaccgtgtttgtcaatgatcgc 1095
Score = 85.7 bits (43), Expect = 2e-15
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 877 agtcctcgcattttggtaatctcctgcattgtgaagctttgtgactcgtcaggcagctcc 936
||||| |||||| ||| ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 994 agtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactcgtccggcagctcc 935
Query: 937 ggcggctcgaa 947
|||||||||||
Sbjct: 934 ggcggctcgaa 924
>At2g20950.1 68415.m02471 expressed protein
Length = 2230
Score = 141 bits (71), Expect = 4e-32
Identities = 333/419 (79%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 353 ttcatctccagctgccctagcctccctgcgaccaccgtcaccttctctct-cattctttg 411
||||||||||||||||| |||| || || | | ||||||| ||||||| ||||| ||
Sbjct: 1564 ttcatctccagctgccccagccgtcccgccaactccgtcactctctctctacattccttc 1505
Query: 412 atttccttctccctcttcaccagctccgccgtcatctcctccatctccccctttttcgcc 471
|||||||||| ||| | ||||||| || |||||||||||||||| || ||||
Sbjct: 1504 gtttccttctctctccgccgcagctcctccctcatctcctccatctcttttttccccgcc 1445
Query: 472 gtcagatctctctcgcacacctctttctccaccttcgccgtgtcgtactgcccgaaatac 531
|||| || || |||||| |||| || | | ||||||||||||||||| |||| | |||
Sbjct: 1444 gtcatttccctatcgcactcctccctcacaatcttcgccgtgtcgtacttcccgtagtac 1385
Query: 532 tccaccgcctccgccagttccgttaccgctgtctttagccacgacacgttgattttcacc 591
|||||||||||||| || ||||| |||||||| || |||||||| || | ||||||||||
Sbjct: 1384 tccaccgcctccgctagctccgtcaccgctgttttgagccacgatacatcgattttcacc 1325
Query: 592 gactccatgtctttcaccaccgccgcgatctccgccacgcgcgtttttgtcaaatccctc 651
|| |||||||| ||||| ||||||||||| |||||||| ||||| || |||| ||| |||
Sbjct: 1324 gaatccatgtccttcacgaccgccgcgatttccgccactcgcgtcttcgtcagatctctc 1265
Query: 652 agaaccgtctttttcagctccatcaccacagcggctagggattccaggtaataagaccga 711
| |||| |||||| ||||| || | |||||||||||||| || ||| | ||||
Sbjct: 1264 aacgccgttgatttcagttccattactgctgcggctagggattcgagataaaacgacctc 1205
Query: 712 gttgccattgcttgcagcttcgaggaggctgcgatgtcgccgtgcttgtcgatgatcgc 770
|||| | | ||| | |||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 1204 gttgaggtagattgtaacttcgacgaggcggcgatgtcaccgtgtttgtcaatgatcgc 1146
Score = 85.7 bits (43), Expect = 2e-15
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 877 agtcctcgcattttggtaatctcctgcattgtgaagctttgtgactcgtcaggcagctcc 936
||||| |||||| ||| ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 1045 agtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactcgtccggcagctcc 986
Query: 937 ggcggctcgaa 947
|||||||||||
Sbjct: 985 ggcggctcgaa 975
Score = 42.1 bits (21), Expect = 0.029
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 2106 ggagatggagaagggcttctgaatgggtgaaatgggctcgcattg 2150
|||| |||||| |||||||||| ||||||||||| ||| |||||
Sbjct: 553 ggagctggagagcggcttctgaaggggtgaaatggactcacattg 509
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 113,007
Number of Sequences: 29161
Number of extensions: 113007
Number of successful extensions: 7705
Number of sequences better than 10.0: 549
length of query: 3193
length of database: 44,058,232
effective HSP length: 19
effective length of query: 3174
effective length of database: 43,504,173
effective search space: 138082245102
effective search space used: 138082245102
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)