BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 266951.f
         (711 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568092.1|  expressed protein; protein id: At5g01590.1...   386   e-106
pir||T48180  hypothetical protein F7A7.110 - Arabidopsis tha...   386   e-106
gb|AAM63724.1|  unknown [Arabidopsis thaliana]                    143   2e-33
ref|NP_386846.1|  HYPOTHETICAL SIGNAL PEPTIDE PROTEIN [Sinor...    37   0.20 
gb|EAA12083.1|  agCP9119 [Anopheles gambiae str. PEST]             34   2.2  

>ref|NP_568092.1| expressed protein; protein id: At5g01590.1, supported by cDNA:
           gi_15292666 [Arabidopsis thaliana]
          Length = 424

 Score =  386 bits (991), Expect = e-106
 Identities = 181/182 (99%), Positives = 181/182 (99%)
 Frame = -2

Query: 548 MSSMNFNPFQNWFEKPPNPVPSIXFVSLADSFFPKSQSPNFASIGLPKFSKKSPKPETAG 369
           MSSMNFNPFQNWFEKPPNPVPSI FVSLADSFFPKSQSPNFASIGLPKFSKKSPKPETAG
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKSQSPNFASIGLPKFSKKSPKPETAG 60

Query: 368 TDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWES 189
           TDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWES
Sbjct: 61  TDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWES 120

Query: 188 FRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAIK 9
           FRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAIK
Sbjct: 121 FRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAIK 180

Query: 8   SK 3
           SK
Sbjct: 181 SK 182



>pir||T48180 hypothetical protein F7A7.110 - Arabidopsis
           thaliana|gi|7327818|emb|CAB82275.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 559

 Score =  386 bits (991), Expect = e-106
 Identities = 181/182 (99%), Positives = 181/182 (99%)
 Frame = -2

Query: 548 MSSMNFNPFQNWFEKPPNPVPSIXFVSLADSFFPKSQSPNFASIGLPKFSKKSPKPETAG 369
           MSSMNFNPFQNWFEKPPNPVPSI FVSLADSFFPKSQSPNFASIGLPKFSKKSPKPETAG
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKSQSPNFASIGLPKFSKKSPKPETAG 60

Query: 368 TDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWES 189
           TDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWES
Sbjct: 61  TDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWES 120

Query: 188 FRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAIK 9
           FRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAIK
Sbjct: 121 FRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAIK 180

Query: 8   SK 3
           SK
Sbjct: 181 SK 182



>gb|AAM63724.1| unknown [Arabidopsis thaliana]
          Length = 90

 Score =  143 bits (361), Expect = 2e-33
 Identities = 71/86 (82%), Positives = 71/86 (82%)
 Frame = +3

Query: 54  MRNGSPVILVFFPXXXXXXXXXXXXXXXGNLLGASHKLNHRTRSKTLPPFLLSFNLFCAR 233
           MRNGSPVILVFFP               GNLLGASHKLNHRTRSKTLPPFLLSFNLFCAR
Sbjct: 1   MRNGSPVILVFFPIRRVVILELHLVHIVGNLLGASHKLNHRTRSKTLPPFLLSFNLFCAR 60

Query: 234 ILLLLENWIFVEKLIHFWSVPVIRYV 311
           ILLLLENWIFVEKLIHFWSVPVIRYV
Sbjct: 61  ILLLLENWIFVEKLIHFWSVPVIRYV 86



>ref|NP_386846.1| HYPOTHETICAL SIGNAL PEPTIDE PROTEIN [Sinorhizobium
           meliloti]|gi|15075764|emb|CAC47319.1| HYPOTHETICAL
           SIGNAL PEPTIDE PROTEIN [Sinorhizobium meliloti]
          Length = 356

 Score = 37.4 bits (85), Expect = 0.20
 Identities = 40/130 (30%), Positives = 58/130 (43%), Gaps = 1/130 (0%)
 Frame = -2

Query: 503 PPNPVPSIXFVSLADSFFPKSQSPNFASIGLPKFSKKSPKPETAGTDEPGPYK-QIAEQF 327
           PP P P    +   +   P ++ P      LP+  K+  KP+T    EP P + Q AE  
Sbjct: 113 PPTPDPVKEEIEKVEETKPAAE-PATEVAALPE-PKQEVKPDTK--PEPAPAEEQPAENP 168

Query: 326 LWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWESFRASPVVQFMTRAE 147
             E E +PD   TP+V   + +     K      EE++ EQK     +AS   +    A+
Sbjct: 169 --EAEALPDRVPTPQVKPKVEKPAQTAKTPERKKEEVKKEQK-----KASSQKESDFNAD 221

Query: 146 EIADDMNKME 117
           EIA  +NK E
Sbjct: 222 EIAALLNKQE 231



>gb|EAA12083.1| agCP9119 [Anopheles gambiae str. PEST]
          Length = 2644

 Score = 33.9 bits (76), Expect = 2.2
 Identities = 27/104 (25%), Positives = 41/104 (38%), Gaps = 2/104 (1%)
 Frame = -2

Query: 509  EKPPNPVPSIXFVSLAD--SFFPKSQSPNFASIGLPKFSKKSPKPETAGTDEPGPYKQIA 336
            EK P PVP    +   +  +  P  Q P   ++   + SK  P  E AG DE  P +Q  
Sbjct: 1522 EKKPEPVPMYDEIEETEQQTVAPTKQEPVPTTVAQEQESKVQPTTEAAGNDEVSPVEQDK 1581

Query: 335  EQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQ 204
             +   E E       +  VD         E++++    + E EQ
Sbjct: 1582 PEADSEPEQPAPVTQSSPVDTTPAIVQDIEQEQDEQEHDTEPEQ 1625



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 119
effective length of database: 269,842,067
effective search space used: 31571521839
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)