BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.9.C1
(1901 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171620.2| fatty acid elongase 3-ketoacyl-CoA synthas... 1000 0.0
gb|AAC99312.1| fatty acid elongase 3-ketoacyl-CoA synthase ... 985 0.0
gb|AAC34858.1| senescence-associated protein 15 [Hemerocall... 666 0.0
ref|NP_180232.1| putative beta-ketoacyl-CoA synthase; prote... 619 e-176
emb|CAC01441.1| putative fatty acid elongase [Zea mays] 617 e-175
>ref|NP_171620.2| fatty acid elongase 3-ketoacyl-CoA synthase 1; protein id:
At1g01120.1, supported by cDNA: gi_18377663, supported by
cDNA: gi_20465992 [Arabidopsis
thaliana]|gi|25406715|pir||F86141 protein T25K16.11
[imported] - Arabidopsis
thaliana|gi|6715643|gb|AAF26470.1|AC007323_11 T25K16.11
[Arabidopsis thaliana]|gi|18377664|gb|AAL66982.1|
putative fatty acid elongase 3-ketoacyl-CoA synthase 1
[Arabidopsis thaliana]|gi|20465993|gb|AAM20218.1|
putative fatty acid elongase 3-ketoacyl-CoA synthase 1
[Arabidopsis thaliana]
Length = 528
Score = 1000 bits (2586), Expect = 0.0
Identities = 504/528 (95%), Positives = 504/528 (95%)
Frame = +2
Query: 191 MERTNSIEMDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNVXXXX 370
MERTNSIEMDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNV
Sbjct: 1 MERTNSIEMDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTIL 60
Query: 371 XXXXXXXXXXXXXXXXXXXXFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSK 550
FDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSK
Sbjct: 61 FFLIILPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSK 120
Query: 551 PVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGI 730
PVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGI
Sbjct: 121 PVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGI 180
Query: 731 TSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVN 910
TSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVN
Sbjct: 181 TSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVN 240
Query: 911 HYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSM 1090
HYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSM
Sbjct: 241 HYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSM 300
Query: 1091 LLCNCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGV 1270
LLCNCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGV
Sbjct: 301 LLCNCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGV 360
Query: 1271 SLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFE 1450
SLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFE
Sbjct: 361 SLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFE 420
Query: 1451 HFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAG 1630
HFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAG
Sbjct: 421 HFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAG 480
Query: 1631 DRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKVVQ 1774
DRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKVVQ
Sbjct: 481 DRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKVVQ 528
>gb|AAC99312.1| fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
Length = 520
Score = 985 bits (2547), Expect = 0.0
Identities = 496/520 (95%), Positives = 496/520 (95%)
Frame = +2
Query: 215 MDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNVXXXXXXXXXXXX 394
MDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNV
Sbjct: 1 MDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTILFFLIILPL 60
Query: 395 XXXXXXXXXXXXFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFS 574
FDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFS
Sbjct: 61 TGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFS 120
Query: 575 CYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKLN 754
CYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKLN
Sbjct: 121 CYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKLN 180
Query: 755 MSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMREDI 934
MSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMREDI
Sbjct: 181 MSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMREDI 240
Query: 935 KSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFR 1114
KSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFR
Sbjct: 241 KSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFR 300
Query: 1115 MGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGVSLARELMS 1294
MGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGVSLARELMS
Sbjct: 301 MGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGVSLARELMS 360
Query: 1295 VAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFEHFCIHAGG 1474
VAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFEHFCIHAGG
Sbjct: 361 VAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFEHFCIHAGG 420
Query: 1475 RAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAF 1654
RAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAF
Sbjct: 421 RAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAF 480
Query: 1655 GSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKVVQ 1774
GSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKVVQ
Sbjct: 481 GSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKVVQ 520
>gb|AAC34858.1| senescence-associated protein 15 [Hemerocallis hybrid cultivar]
Length = 517
Score = 666 bits (1719), Expect = 0.0
Identities = 342/526 (65%), Positives = 404/526 (76%), Gaps = 9/526 (1%)
Frame = +2
Query: 215 MDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNVXXXXXXXXXXXX 394
MDRERLTAEMAFRDSS VI+IRR+LPD L SVKLKYVKLG ++
Sbjct: 1 MDRERLTAEMAFRDSS-IVIKIRRKLPDFLQSVKLKYVKLGYRSTTKPPFYLLLPLLLIA 59
Query: 395 XXXXXXXXXXXXFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFS 574
F +N ++ TA + + L +L +Y R +PVYLVDF+
Sbjct: 60 ASLIFRIHTTLTFP------ANFSIDFVTAFSSSSIALL--LLGVYYTRRPRPVYLVDFA 111
Query: 575 CYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKLN 754
CYKPEDE KIS + FL MTE +F D ++ FQ +I+ R+GLGDETYLP GI + PPKL+
Sbjct: 112 CYKPEDEHKISNEGFLEMTESTTAFNDKSLDFQTKITVRSGLGDETYLPPGIQARPPKLS 171
Query: 755 MSEARAEAEAVMFGALDSLFEKTGIKPA-EVGILIVNCSLFNPTPSLSAMIVNHYKMRED 931
M+EAR EAE VMFG LD+LFE TGI P+ ++GILIVNCSLFNPTPSLSAMIVNHYKMRED
Sbjct: 172 MAEARLEAETVMFGCLDALFESTGINPSRDIGILIVNCSLFNPTPSLSAMIVNHYKMRED 231
Query: 932 IKSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIF 1111
+KS+NLGGMGCSAGLISIDLA ++L+ANPNSYA+V+STENITLNWYFGNDRSMLL NCIF
Sbjct: 232 VKSFNLGGMGCSAGLISIDLAKDMLQANPNSYALVLSTENITLNWYFGNDRSMLLSNCIF 291
Query: 1112 RMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGVSLARELM 1291
RMGGAA+LLSN+R+D K++KY L++ VRTHKG+DD YNCVYQ+EDE G +GVSLA+ELM
Sbjct: 292 RMGGAAVLLSNKRKDAKRAKYRLLHTVRTHKGADDSCYNCVYQREDEGGKVGVSLAKELM 351
Query: 1292 SVAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLK-VKPYIPDFKLAFEHFCIHA 1468
+VAGDALKTNITTLGP+VLPL+EQ FL +L+ RK+ KLK V+PYIP+FK AFEHFC+HA
Sbjct: 352 AVAGDALKTNITTLGPLVLPLTEQGKFLATLITRKLLKLKGVRPYIPNFKRAFEHFCVHA 411
Query: 1469 GGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQI 1648
GGRAVLDEV+KNL L+ ME SR LHRFGNTSSSSLWYE+AY EAKGRV GDR+WQI
Sbjct: 412 GGRAVLDEVEKNLGLEKTDMEASRSVLHRFGNTSSSSLWYELAYNEAKGRVGKGDRVWQI 471
Query: 1649 AFGSGFKCNSAVWKALRPVSTEEMTG-------NAWAGSIDQYPVK 1765
FGSGFKCNSAVWKA++ V + T N W ID+YPVK
Sbjct: 472 GFGSGFKCNSAVWKAMKDVPAIDRTASGSSRMCNPWGDCIDRYPVK 517
>ref|NP_180232.1| putative beta-ketoacyl-CoA synthase; protein id: At2g26640.1
[Arabidopsis thaliana]|gi|25407838|pir||A84663 probable
beta-ketoacyl-CoA synthase [imported] - Arabidopsis
thaliana|gi|2760830|gb|AAB95298.1| putative
beta-ketoacyl-CoA synthase [Arabidopsis
thaliana]|gi|28392937|gb|AAO41904.1| putative
beta-ketoacyl-CoA synthase [Arabidopsis thaliana]
Length = 509
Score = 619 bits (1595), Expect = e-176
Identities = 299/495 (60%), Positives = 377/495 (75%)
Frame = +2
Query: 284 RRLPDLLTSVKLKYVKLGLHNSCNVXXXXXXXXXXXXXXXXXXXXXXXXFDTFSELWSNQ 463
R LPD SVKLKYVKLG H + LW +
Sbjct: 15 RNLPDFKKSVKLKYVKLGYHY---LITHGMYLFLSPLVLVIAAQISTFSVTDLRSLWEH- 70
Query: 464 AVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKISVDSFLTMTEENG 643
+Q + + + C + L F++T+Y R +PVYLV+FSC+KP++ RK + F+ ++ G
Sbjct: 71 -LQYNLISVVVCSMLLVFLMTIYFMTRPRPVYLVNFSCFKPDESRKCTKKIFMDRSKLTG 129
Query: 644 SFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKLNMSEARAEAEAVMFGALDSLFEKT 823
SFT++ ++FQ++I R+GLG+ TYLP + + PP M EAR EAE VMFGA+D L KT
Sbjct: 130 SFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPNPCMKEARKEAETVMFGAIDELLAKT 189
Query: 824 GIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMREDIKSYNLGGMGCSAGLISIDLANNL 1003
+ P ++GILIVNCSLFNPTPSLSAM+VNHYK+R +I SYNLGGMGCSAGLISIDLA +L
Sbjct: 190 NVNPKDIGILIVNCSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKHL 249
Query: 1004 LKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAILLSNRRQDRKKSKYSLV 1183
L + PN+YA+V+S ENITLNWYFGNDRS L+ NC+FRMGGAAILLSN+R DR++SKY LV
Sbjct: 250 LHSIPNTYAMVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNKRWDRRRSKYELV 309
Query: 1184 NVVRTHKGSDDKNYNCVYQKEDERGTIGVSLARELMSVAGDALKTNITTLGPMVLPLSEQ 1363
+ VRTHKG+DDK + C+ Q+ED IGV+L++ELM+VAGDALKTNITTLGP+VLP SEQ
Sbjct: 310 DTVRTHKGADDKCFGCITQEEDSASKIGVTLSKELMAVAGDALKTNITTLGPLVLPTSEQ 369
Query: 1364 LMFLISLVKRKMFKLKVKPYIPDFKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRM 1543
L+F +LV RK+FK+K+KPYIPDFKLAFEHFCIHAGGRAVLDE++KNL L +WHMEPSRM
Sbjct: 370 LLFFATLVGRKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLKLTEWHMEPSRM 429
Query: 1544 TLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAFGSGFKCNSAVWKALRPVSTEEMT 1723
TL+RFGNTSSSSLWYE+AY+EAKGR+K GDR+WQIAFGSGFKCNS+VW+A+R V+ ++
Sbjct: 430 TLYRFGNTSSSSLWYELAYSEAKGRIKKGDRIWQIAFGSGFKCNSSVWRAVRSVNPKK-E 488
Query: 1724 GNAWAGSIDQYPVKV 1768
N W I ++PV+V
Sbjct: 489 KNPWMDEIHEFPVEV 503
>emb|CAC01441.1| putative fatty acid elongase [Zea mays]
Length = 513
Score = 617 bits (1591), Expect = e-175
Identities = 300/491 (61%), Positives = 380/491 (77%)
Frame = +2
Query: 296 DLLTSVKLKYVKLGLHNSCNVXXXXXXXXXXXXXXXXXXXXXXXXFDTFSELWSNQAVQL 475
D SV+LKYVKLG H + ++LW + ++
Sbjct: 22 DFQQSVRLKYVKLGYHY---LISHGMYLLLSPLMALVAVQLSTVSPHDLADLW--EQLRF 76
Query: 476 DTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTD 655
+ + + C L F+ T+Y R +PVYL+DF+CYKPE ERK + ++F+ ++ GSFTD
Sbjct: 77 NLLSVVACSTLLVFLSTVYFLTRPRPVYLLDFACYKPESERKCTRETFMHCSKLTGSFTD 136
Query: 656 DTVQFQQRISNRAGLGDETYLPRGITSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKP 835
+ ++FQ++I R+GLG++TYLP + PP M EAR EA AVMFGA+D L EKTG++P
Sbjct: 137 ENLEFQRKILERSGLGEDTYLPPAVLRVPPNPCMDEARKEARAVMFGAIDQLLEKTGVRP 196
Query: 836 AEVGILIVNCSLFNPTPSLSAMIVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKAN 1015
++G+L+VNCSLFNPTPSLSAM+VNHYK+R +I SYNLGGMGCSAGLI DLA +LL+ +
Sbjct: 197 KDIGVLVVNCSLFNPTPSLSAMVVNHYKLRGNIVSYNLGGMGCSAGLI--DLAKDLLQVH 254
Query: 1016 PNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAILLSNRRQDRKKSKYSLVNVVR 1195
PNSYA+V+S ENITLNWYFGN+RSML+ NC+FRMGGAAILLSNRR DR++SKY LV+ VR
Sbjct: 255 PNSYALVISMENITLNWYFGNNRSMLVSNCLFRMGGAAILLSNRRSDRRRSKYELVHTVR 314
Query: 1196 THKGSDDKNYNCVYQKEDERGTIGVSLARELMSVAGDALKTNITTLGPMVLPLSEQLMFL 1375
THKG++DK + CV Q+EDE G IGVSL+++LM+VAGDALKTNITTLGP+VLPLSEQL+F+
Sbjct: 315 THKGANDKCFGCVTQEEDEIGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPLSEQLLFM 374
Query: 1376 ISLVKRKMFKLKVKPYIPDFKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHR 1555
+L+ +K+ K+K+KPYIPDFKLAFEHFCIHAGGRAVLDE++KNL+L DWHMEPSRMTL+R
Sbjct: 375 GTLIAKKVLKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELTDWHMEPSRMTLYR 434
Query: 1556 FGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAW 1735
FGNTSSSSLWYE+AYTEAKGR++ DR+WQIAFGSGFKCNSAVWKALR V+ + + W
Sbjct: 435 FGNTSSSSLWYELAYTEAKGRIRKRDRIWQIAFGSGFKCNSAVWKALRTVNPAK-EKSPW 493
Query: 1736 AGSIDQYPVKV 1768
ID +PV V
Sbjct: 494 MDEIDNFPVDV 504
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 129
effective length of database: 256,451,607
effective search space used: 129251609928
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)