BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.2.C1
(960 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171613.1| soluble inorganic pyrophosphatase, putativ... 431 e-120
pir||C86141 protein T25K16.5 [imported] - Arabidopsis thali... 417 e-115
gb|AAD46520.1|AF149116_1 soluble inorganic pyrophosphatase ... 393 e-108
ref|NP_182209.1| putative inorganic pyrophosphatase; protei... 390 e-107
ref|NP_192057.1| putative inorganic phosphatase; protein id... 389 e-107
>ref|NP_171613.1| soluble inorganic pyrophosphatase, putative; protein id:
At1g01050.1, supported by cDNA: 124537., supported by
cDNA: gi_15450698, supported by cDNA: gi_16323128,
supported by cDNA: gi_17473934, supported by cDNA:
gi_20148452 [Arabidopsis
thaliana]|gi|15450699|gb|AAK96621.1| At1g01050/T25K16_5
[Arabidopsis thaliana]|gi|16323129|gb|AAL15299.1|
At1g01050/T25K16_5 [Arabidopsis
thaliana]|gi|17473935|gb|AAL38377.1| putative inorganic
pyrophosphatase [Arabidopsis
thaliana]|gi|20148453|gb|AAM10117.1| putative inorganic
pyrophosphatase [Arabidopsis
thaliana]|gi|21537232|gb|AAM61573.1| soluble inorganic
pyrophosphatase, putative [Arabidopsis
thaliana]|gi|24797046|gb|AAN64535.1| At1g01050/T25K16_5
[Arabidopsis thaliana]
Length = 212
Score = 431 bits (1109), Expect = e-120
Identities = 212/212 (100%), Positives = 212/212 (100%)
Frame = +1
Query: 121 MSEETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGSK 300
MSEETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGSK
Sbjct: 1 MSEETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGSK 60
Query: 301 VKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLRA 480
VKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLRA
Sbjct: 61 VKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLRA 120
Query: 481 RAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNENKEV 660
RAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNENKEV
Sbjct: 121 RAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNENKEV 180
Query: 661 AVNDFLPSESAVEAIQYSMDLYAEYILHTLRR 756
AVNDFLPSESAVEAIQYSMDLYAEYILHTLRR
Sbjct: 181 AVNDFLPSESAVEAIQYSMDLYAEYILHTLRR 212
>pir||C86141 protein T25K16.5 [imported] - Arabidopsis
thaliana|gi|6715648|gb|AAF26475.1|AC007323_16 T25K16.5
[Arabidopsis thaliana]
Length = 230
Score = 417 bits (1071), Expect = e-115
Identities = 211/230 (91%), Positives = 211/230 (91%), Gaps = 18/230 (7%)
Frame = +1
Query: 121 MSEETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGSK 300
MSEETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGSK
Sbjct: 1 MSEETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGSK 60
Query: 301 VKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLRA 480
VKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLRA
Sbjct: 61 VKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLRA 120
Query: 481 RAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFED--------- 633
RAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFED
Sbjct: 121 RAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDCILFLQCSS 180
Query: 634 ---------YKKNENKEVAVNDFLPSESAVEAIQYSMDLYAEYILHTLRR 756
KKNENKEVAVNDFLPSESAVEAIQYSMDLYAEYILHTLRR
Sbjct: 181 LFISIDLSTNKKNENKEVAVNDFLPSESAVEAIQYSMDLYAEYILHTLRR 230
>gb|AAD46520.1|AF149116_1 soluble inorganic pyrophosphatase [Populus tremula x Populus
tremuloides]
Length = 215
Score = 393 bits (1009), Expect = e-108
Identities = 193/215 (89%), Positives = 201/215 (92%), Gaps = 3/215 (1%)
Frame = +1
Query: 121 MSEETKDNQR---LQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITK 291
MS+ TK + + APRLNERILSSLSRR+VAAHPWHDLEIGPGAP IFNVVVEITK
Sbjct: 1 MSDVTKTQENEVETKHQAPRLNERILSSLSRRTVAAHPWHDLEIGPGAPHIFNVVVEITK 60
Query: 292 GSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCF 471
GSKVKYELDKKTGLIKVDRILYSSVVYPHNYGF+PRTLCEDNDP+DVLV+MQEPVLPGCF
Sbjct: 61 GSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCF 120
Query: 472 LRARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNEN 651
LRARAIGLMPMIDQGEKDDKIIAVC DDPEYKHYTDIKEL PHRLSEIRRFFEDYKKNEN
Sbjct: 121 LRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELAPHRLSEIRRFFEDYKKNEN 180
Query: 652 KEVAVNDFLPSESAVEAIQYSMDLYAEYILHTLRR 756
KEVAVNDFLPS +AVEAIQYSMDLYAEYILHTLRR
Sbjct: 181 KEVAVNDFLPSNTAVEAIQYSMDLYAEYILHTLRR 215
>ref|NP_182209.1| putative inorganic pyrophosphatase; protein id: At2g46860.1
[Arabidopsis thaliana]|gi|7436034|pir||T02201 probable
inorganic diphosphatase (EC 3.6.1.1) - Arabidopsis
thaliana|gi|3522960|gb|AAC34242.1| putative inorganic
pyrophosphatase [Arabidopsis
thaliana]|gi|20197320|gb|AAM15021.1| putative inorganic
pyrophosphatase [Arabidopsis thaliana]
Length = 216
Score = 390 bits (1001), Expect = e-107
Identities = 187/210 (89%), Positives = 200/210 (95%)
Frame = +1
Query: 127 EETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGSKVK 306
EET+++ + RP P+LNERILS+LSRRSVAAHPWHDLEIGP AP +FNVVVEITKGSKVK
Sbjct: 7 EETQESSQSPRPVPKLNERILSTLSRRSVAAHPWHDLEIGPEAPLVFNVVVEITKGSKVK 66
Query: 307 YELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLRARA 486
YELDKKTGLIKVDRILYSSVVYPHNYGF+PRTLCEDNDP+DVLV+MQEPVLPGCFLRARA
Sbjct: 67 YELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARA 126
Query: 487 IGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNENKEVAV 666
IGLMPMIDQGEKDDKIIAVC DDPEYKH+TDIK+L PHRL EIRRFFEDYKKNENK+VAV
Sbjct: 127 IGLMPMIDQGEKDDKIIAVCADDPEYKHFTDIKQLAPHRLQEIRRFFEDYKKNENKKVAV 186
Query: 667 NDFLPSESAVEAIQYSMDLYAEYILHTLRR 756
NDFLPSESA EAIQYSMDLYAEYILHTLRR
Sbjct: 187 NDFLPSESAHEAIQYSMDLYAEYILHTLRR 216
>ref|NP_192057.1| putative inorganic phosphatase; protein id: At4g01480.1, supported
by cDNA: gi_15450871, supported by cDNA: gi_20148676
[Arabidopsis thaliana]|gi|7436033|pir||T01946 inorganic
pyrophosphatase homolog F11O4.12 - Arabidopsis
thaliana|gi|3695383|gb|AAC62786.1| similar to inorganic
pyrophosphatase (Pfam: PF00719 Pyrophosphatase, E-value:
2.7e-88) [Arabidopsis
thaliana]|gi|7268191|emb|CAB77718.1| putative inorganic
phosphatase [Arabidopsis
thaliana]|gi|15450872|gb|AAK96707.1| similar to
inorganic pyrophosphatase [Arabidopsis
thaliana]|gi|20148677|gb|AAM10229.1| similar to
inorganic pyrophosphatase [Arabidopsis thaliana]
Length = 216
Score = 389 bits (998), Expect = e-107
Identities = 192/213 (90%), Positives = 199/213 (93%), Gaps = 3/213 (1%)
Frame = +1
Query: 127 EETKDNQ---RLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGS 297
EE K +Q +LQ P PRLNERILSSLS+RSVAAHPWHDLEIGPGAP IFNVV+EI+KGS
Sbjct: 4 EEVKTSQPQKKLQNPTPRLNERILSSLSKRSVAAHPWHDLEIGPGAPVIFNVVIEISKGS 63
Query: 298 KVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLR 477
KVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLR
Sbjct: 64 KVKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLR 123
Query: 478 ARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNENKE 657
ARAIGLMPMIDQGEKDDKIIAVCVDDPEYKH T+I ELPPHRLSEIRRFFEDYKKNENKE
Sbjct: 124 ARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHITNINELPPHRLSEIRRFFEDYKKNENKE 183
Query: 658 VAVNDFLPSESAVEAIQYSMDLYAEYILHTLRR 756
VAVNDFL A+EAIQYSMDLYAEYILHTLRR
Sbjct: 184 VAVNDFLQPGPAIEAIQYSMDLYAEYILHTLRR 216
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 123
effective length of database: 264,485,883
effective search space used: 51839233068
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)