BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PTA.CL.41.cl.4142.Contig1
         (243 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O43103|SID2_USTMA  Ferrichrome siderophore peptide synthe...    31   5.0  



>sp|O43103|SID2_USTMA Ferrichrome siderophore peptide synthetase|gi|25466509|pir||T52486
            ferrichrome siderophore peptide synthetase - smut fungus 
            (Ustilago maydis)|gi|2731633|gb|AAB93493.1| ferrichrome
            siderophore peptide synthetase [Ustilago maydis]
          Length = 3947

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 79   T*HLKLNFASPVLPFLSTRQEPQKTTSY 162
            T H+K N  +P + F S+ QEP K TSY
Sbjct: 2498 TEHVKANPDAPAIVFASSMQEPPKVTSY 2525





  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 56
effective length of database: 354,201,965
effective search space used: 8500847160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)










BLAST Search Results