BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Z34743.r
         (419 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193130.1|  adenosylhomocysteinase; protein id: At4g13...    45   3e-04
gb|AAK92718.1|  putative S-adenosyl-L-homocysteinas protein ...    43   8e-04
ref|NP_189023.1|  S-adenosyl-L-homocysteinas, putative; prot...    43   8e-04
gb|AAM19782.1|  AT3g23810/MYM9_15 [Arabidopsis thaliana]           43   8e-04
gb|AAM62888.1|  adenosylhomocysteinase [Arabidopsis thaliana]      43   8e-04

>ref|NP_193130.1| adenosylhomocysteinase; protein id: At4g13940.1, supported by cDNA:
           16846., supported by cDNA: gi_13358226, supported by
           cDNA: gi_14596156, supported by cDNA: gi_15146275,
           supported by cDNA: gi_19699157, supported by cDNA:
           gi_20148278, supported by cDNA: gi_3088578 [Arabidopsis
           thaliana]|gi|6174970|sp|O23255|SAHH_ARATH
           Adenosylhomocysteinase (S-adenosyl-L-homocysteine
           hydrolase) (AdoHcyase)|gi|7435510|pir||C71400
           adenosylhomocysteinase (EC 3.3.1.1) [similarity] -
           Arabidopsis thaliana|gi|2244750|emb|CAB10173.1|
           adenosylhomocysteinase [Arabidopsis
           thaliana]|gi|3088579|gb|AAC14714.1|
           S-adenosyl-L-homocysteine hydrolase [Arabidopsis
           thaliana]|gi|7268098|emb|CAB78436.1|
           adenosylhomocysteinase [Arabidopsis
           thaliana]|gi|11762222|gb|AAG40389.1|AF325037_1 AT4g13940
           [Arabidopsis thaliana]|gi|14596157|gb|AAK68806.1|
           adenosylhomocysteinase [Arabidopsis
           thaliana]|gi|15146276|gb|AAK83621.1| AT4g13940/dl3010w
           [Arabidopsis thaliana]|gi|19699158|gb|AAL90945.1|
           AT4g13940/dl3010w [Arabidopsis
           thaliana]|gi|20148279|gb|AAM10030.1|
           adenosylhomocysteinase [Arabidopsis
           thaliana]|gi|27311597|gb|AAO00764.1|
           adenosylhomocysteinase [Arabidopsis thaliana]
          Length = 485

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 21/27 (77%), Positives = 23/27 (84%)
 Frame = -2

Query: 277 MRVTSLGARLTKLSKDQSDYFSIPIEG 197
           + +  LGARLTKLSKDQSDY SIPIEG
Sbjct: 450 LHLGKLGARLTKLSKDQSDYVSIPIEG 476



>gb|AAK92718.1| putative S-adenosyl-L-homocysteinas protein [Arabidopsis thaliana]
          Length = 485

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 19/27 (70%), Positives = 23/27 (84%)
 Frame = -2

Query: 277 MRVTSLGARLTKLSKDQSDYFSIPIEG 197
           + +  LGARLTKL+KDQSDY SIP+EG
Sbjct: 450 LHLGKLGARLTKLTKDQSDYVSIPVEG 476



>ref|NP_189023.1| S-adenosyl-L-homocysteinas, putative; protein id: At3g23810.1,
           supported by cDNA: gi_15292698, supported by cDNA:
           gi_16226775, supported by cDNA: gi_16649036, supported
           by cDNA: gi_20260073, supported by cDNA: gi_20453074
           [Arabidopsis thaliana]|gi|9293955|dbj|BAB01858.1|
           S-adenosyl L-homocystein hydrolase [Arabidopsis
           thaliana]|gi|16649037|gb|AAL24370.1| S-adenosyl
           L-homocystein hydrolase [Arabidopsis
           thaliana]|gi|20260074|gb|AAM13384.1| S-adenosyl
           L-homocystein hydrolase [Arabidopsis
           thaliana]|gi|23297630|gb|AAN12996.1| putative
           S-adenosyl-L-homocysteinase [Arabidopsis thaliana]
          Length = 485

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 19/27 (70%), Positives = 23/27 (84%)
 Frame = -2

Query: 277 MRVTSLGARLTKLSKDQSDYFSIPIEG 197
           + +  LGARLTKL+KDQSDY SIP+EG
Sbjct: 450 LHLGKLGARLTKLTKDQSDYVSIPVEG 476



>gb|AAM19782.1| AT3g23810/MYM9_15 [Arabidopsis thaliana]
          Length = 485

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 19/27 (70%), Positives = 23/27 (84%)
 Frame = -2

Query: 277 MRVTSLGARLTKLSKDQSDYFSIPIEG 197
           + +  LGARLTKL+KDQSDY SIP+EG
Sbjct: 450 LHLGKLGARLTKLTKDQSDYVSIPVEG 476



>gb|AAM62888.1| adenosylhomocysteinase [Arabidopsis thaliana]
          Length = 485

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = -2

Query: 277 MRVTSLGARLTKLSKDQSDYFSIPIEG 197
           + +  LGARLTKLSKDQ DY SIPIEG
Sbjct: 450 LHLGKLGARLTKLSKDQXDYVSIPIEG 476



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 115
effective length of database: 275,198,251
effective search space used: 6604758024
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)