BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 11952.f
(1252 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178148.1| putative oxidoreductase; protein id: At1g8... 264 e-170
ref|NP_173007.1| hypothetical protein; protein id: At1g1554... 125 3e-77
ref|NP_175688.1| putative oxidoreductase; protein id: At1g5... 96 8e-57
ref|NP_175689.1| putative oxidoreductase; protein id: At1g5... 95 3e-53
ref|NP_175691.1| putative oxidoreductase; protein id: At1g5... 87 5e-48
>ref|NP_178148.1| putative oxidoreductase; protein id: At1g80320.1 [Arabidopsis
thaliana]|gi|25406655|pir||G96834 probable
oxidoreductase, 24302-25416 [imported] - Arabidopsis
thaliana|gi|12324982|gb|AAG52438.1|AC018848_9 putative
oxidoreductase; 24302-25416 [Arabidopsis thaliana]
Length = 320
Score = 264 bits (674), Expect(3) = e-170
Identities = 125/125 (100%), Positives = 125/125 (100%)
Frame = -1
Query: 1075 MDSHEEQCLPILDFSSDKLVRGTSHWITTRDDVRRAMEGQGWFVAEFSGVSSDLRDNLLA 896
MDSHEEQCLPILDFSSDKLVRGTSHWITTRDDVRRAMEGQGWFVAEFSGVSSDLRDNLLA
Sbjct: 1 MDSHEEQCLPILDFSSDKLVRGTSHWITTRDDVRRAMEGQGWFVAEFSGVSSDLRDNLLA 60
Query: 895 GMKEMYYLPDQIKIKNENHKASHGYMSMVVDDYRIHESLGIDYATELQACKDFSKLLWPQ 716
GMKEMYYLPDQIKIKNENHKASHGYMSMVVDDYRIHESLGIDYATELQACKDFSKLLWPQ
Sbjct: 61 GMKEMYYLPDQIKIKNENHKASHGYMSMVVDDYRIHESLGIDYATELQACKDFSKLLWPQ 120
Query: 715 GNDPF 701
GNDPF
Sbjct: 121 GNDPF 125
Score = 223 bits (567), Expect(3) = e-170
Identities = 109/112 (97%), Positives = 109/112 (97%)
Frame = -2
Query: 624 QTTHMYAMAMAELDQTVMRMLYESYGMDEKKHSVSHSESTRYLLRMLSYRRQQNGEANTG 445
QTTHMYAM MAELDQTVMRMLYESYGMDEKKHSVSHSESTRYLLRMLSYRRQQNGEANTG
Sbjct: 127 QTTHMYAMTMAELDQTVMRMLYESYGMDEKKHSVSHSESTRYLLRMLSYRRQQNGEANTG 186
Query: 444 FVSHTDKSFMSILHQNHVGGLQLKTMTGQWVGFNPSPTRFVVLSGMGLTVSS 289
FVSHTDKSFMSILHQNHVGGLQLKTMTGQWVGFNPSPTRFVVLSGMGLT S
Sbjct: 187 FVSHTDKSFMSILHQNHVGGLQLKTMTGQWVGFNPSPTRFVVLSGMGLTAWS 238
Score = 157 bits (398), Expect(3) = e-170
Identities = 74/75 (98%), Positives = 75/75 (99%)
Frame = -1
Query: 265 HHKVVMSADEIRYSLGFFSFHKGTIRTPEELVDDQHPLRYNPFEHDGLLRFYESYINSLK 86
+HKVVMSADEIRYSLGFFSFHKGTIRTPEELVDDQHPLRYNPFEHDGLLRFYESYINSLK
Sbjct: 246 YHKVVMSADEIRYSLGFFSFHKGTIRTPEELVDDQHPLRYNPFEHDGLLRFYESYINSLK 305
Query: 85 KSSEDLLQIYCGVTP 41
KSSEDLLQIYCGVTP
Sbjct: 306 KSSEDLLQIYCGVTP 320
>ref|NP_173007.1| hypothetical protein; protein id: At1g15540.1 [Arabidopsis
thaliana]|gi|25518417|pir||C86289 hypothetical protein
T16N11.5 - Arabidopsis
thaliana|gi|8072391|gb|AAF71979.1|AC013453_4 Similar to
oxygenases [Arabidopsis thaliana]
Length = 320
Score = 125 bits (314), Expect(3) = 3e-77
Identities = 57/123 (46%), Positives = 80/123 (64%)
Frame = -1
Query: 1075 MDSHEEQCLPILDFSSDKLVRGTSHWITTRDDVRRAMEGQGWFVAEFSGVSSDLRDNLLA 896
M +E + LPI++ S L + T W TRD VR AME GWFVAE++ + L ++L
Sbjct: 1 MGGNETRELPIINLSDKNLKQNTELWSFTRDSVREAMEHHGWFVAEYNNFPTGLHQSILE 60
Query: 895 GMKEMYYLPDQIKIKNENHKASHGYMSMVVDDYRIHESLGIDYATELQACKDFSKLLWPQ 716
KE+ LP +IK+KNENHKA HGY++M+ D +HE LGID ++Q C+ FS+L+WP
Sbjct: 61 AAKELLDLPVEIKLKNENHKAGHGYITMMSDGQPVHEGLGIDQVNDVQQCRGFSRLMWPD 120
Query: 715 GND 707
+D
Sbjct: 121 DHD 123
Score = 119 bits (299), Expect(3) = 3e-77
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = -2
Query: 624 QTTHMYAMAMAELDQTVMRMLYESYGMDEKKHSVSHSESTRYLLRMLSYRRQQNGEANTG 445
+T H YA AEL+Q V+RML+ESY ++ K++ + TRYLLR+L YRR NGE N
Sbjct: 130 ETVHAYAKMQAELEQLVIRMLFESYNVE--KYTEKYIGGTRYLLRLLKYRRLPNGEPNRK 187
Query: 444 FVSHTDKSFMSILHQNHVGGLQLKT-MTGQWVGFNPSPTRFVVLSG 310
F+SHTDKSF+SILHQNH+ GL LK+ W F PSPTRFVV++G
Sbjct: 188 FISHTDKSFISILHQNHITGLMLKSEKEDVWYHFTPSPTRFVVIAG 233
Score = 88.6 bits (218), Expect(3) = 3e-77
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -1
Query: 265 HHKVVMSADEIRYSLGFFSFHKGTIRTPEELVDDQHPLRYNPFEHDGLLRFYESYINSLK 86
+HKV M + E+RYSLGFFSF +G I TPEE+VD HPL YNPF HDGLL +YE+ L
Sbjct: 248 YHKVEMESVEMRYSLGFFSFQEGMISTPEEMVDKDHPLAYNPFHHDGLLEYYETLEVHL- 306
Query: 85 KSSEDLLQIYCGV 47
K+ + + YCG+
Sbjct: 307 KAHRTMTKAYCGI 319
>ref|NP_175688.1| putative oxidoreductase; protein id: At1g52790.1 [Arabidopsis
thaliana]|gi|25405603|pir||A96569 probable
oxidoreductase, 32373-31266 [imported] - Arabidopsis
thaliana|gi|12324652|gb|AAG52288.1|AC019018_25 putative
oxidoreductase; 32373-31266 [Arabidopsis thaliana]
Length = 310
Score = 96.3 bits (238), Expect(3) = 8e-57
Identities = 47/118 (39%), Positives = 75/118 (62%), Gaps = 1/118 (0%)
Frame = -1
Query: 1051 LPILDFSSDKLVRGTSHWITTRDDVRRAMEGQGWFVAEFSGVSS-DLRDNLLAGMKEMYY 875
+P LDFS + L GT +W +TR+++R+A+E G F+ + + DL D + + +++
Sbjct: 5 IPTLDFSREDLKPGTKYWESTRENIRQALEEYGCFIIDLKDKTPLDLLDRVFGSLVDLFD 64
Query: 874 LPDQIKIKNENHKASHGYMSMVVDDYRIHESLGIDYATELQACKDFSKLLWPQGNDPF 701
LP Q K+KN+ K +GY+ + +HESLGID AT L+A + F+ L+WPQGN+ F
Sbjct: 65 LPTQTKMKNKYDKPLNGYVGQI-PALPLHESLGIDNATSLEATRSFTGLMWPQGNEHF 121
Score = 90.1 bits (222), Expect(3) = 8e-57
Identities = 49/110 (44%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Frame = -2
Query: 627 SQTTHMYAMAMAELDQTVMRMLYESYGMDEKKHSVSHSESTRYLLRMLSYRRQQNGEANT 448
S+ + YA AELDQ V RM+++SY ++ K+ + EST YLLR+L R N
Sbjct: 122 SECLYKYAEFAAELDQMVTRMVFQSYNVE--KYYDPYIESTTYLLRVLKNRAPNNENPTL 179
Query: 447 GFVSHTDKSFMSILHQNHVGGLQLKTMTGQWVGFN-PSPTRFVVLSGMGL 301
GFV+HTDKSF +ILHQ+ V GL+++T G+ + N SP+ F+V++G L
Sbjct: 180 GFVTHTDKSFTTILHQDQVNGLEMETREGERININLSSPSLFMVVAGDAL 229
Score = 79.0 bits (193), Expect(3) = 8e-57
Identities = 37/74 (50%), Positives = 50/74 (67%)
Frame = -1
Query: 271 SKHHKVVMSADEIRYSLGFFSFHKGTIRTPEELVDDQHPLRYNPFEHDGLLRFYESYINS 92
S H+V++S + RYSLG F+F+ GT++ PEEL+D QHPL Y PF+H GLLRFY +
Sbjct: 239 SPRHQVLVSGETDRYSLGMFAFNNGTLQVPEELIDHQHPLMYKPFDHLGLLRFYRT---D 295
Query: 91 LKKSSEDLLQIYCG 50
SE ++ YCG
Sbjct: 296 TGYKSECPIKAYCG 309
>ref|NP_175689.1| putative oxidoreductase; protein id: At1g52800.1 [Arabidopsis
thaliana]|gi|25285707|pir||B96569 probable
oxidoreductase, 33116-34434 [imported] - Arabidopsis
thaliana|gi|12324655|gb|AAG52291.1|AC019018_28 putative
oxidoreductase; 33116-34434 [Arabidopsis thaliana]
Length = 314
Score = 95.1 bits (235), Expect(3) = 3e-53
Identities = 45/104 (43%), Positives = 67/104 (64%)
Frame = -2
Query: 621 TTHMYAMAMAELDQTVMRMLYESYGMDEKKHSVSHSESTRYLLRMLSYRRQQNGEANTGF 442
T H ++ A+AELD+ V+RM++E+YG++ KH SH S YLL+ L Y + F
Sbjct: 129 TVHTFSNAVAELDRLVVRMIFENYGVE--KHYESHVGSKTYLLKFLKYLAPPESISMPAF 186
Query: 441 VSHTDKSFMSILHQNHVGGLQLKTMTGQWVGFNPSPTRFVVLSG 310
HTDK+F+SILHQN V GL++K+ G+W+ P +VV++G
Sbjct: 187 PQHTDKTFLSILHQNDVNGLEVKSKDGEWISLQLPPKSYVVMAG 230
Score = 89.4 bits (220), Expect(3) = 3e-53
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Frame = -1
Query: 1051 LPILDFSSDKLVR-GTSHWITTRDDVRRAMEGQGWFVAEFSGVSSDLRDNLLAGMKEMYY 875
+PILD +S + ++ TS W + + A+E G F+A + GV+ L D++ A +E++
Sbjct: 10 VPILDLTSQQELKPNTSTWRSVSREACEALEEYGCFLAVYDGVTQQLDDSIFAAAEELFD 69
Query: 874 LPDQIKIKNENHKASHGYMSMVVDDYRIHESLGIDYATELQACKDFSKLLWPQGNDPF 701
LP + K KN N K HGY+ + +HE LG+DY T + + F+ L+WPQGND F
Sbjct: 70 LPTETKKKNVNEKPYHGYVGQM-PVIPLHEGLGVDYVTNKEIAQRFTHLMWPQGNDRF 126
Score = 68.9 bits (167), Expect(3) = 3e-53
Identities = 32/75 (42%), Positives = 45/75 (59%)
Frame = -1
Query: 271 SKHHKVVMSADEIRYSLGFFSFHKGTIRTPEELVDDQHPLRYNPFEHDGLLRFYESYINS 92
S H+V M D+ RY+LG FSF + PEELVDD+HPL Y PF++ L+ FY +
Sbjct: 243 SCEHRVTMEGDKTRYTLGLFSFLTDLVSIPEELVDDKHPLMYKPFDNIALINFYTT---K 299
Query: 91 LKKSSEDLLQIYCGV 47
+ + L+ YCG+
Sbjct: 300 EGREANSTLKAYCGI 314
>ref|NP_175691.1| putative oxidoreductase; protein id: At1g52820.1 [Arabidopsis
thaliana]|gi|25285705|pir||D96569 probable
oxidoreductase, 38288-39393 [imported] - Arabidopsis
thaliana|gi|12324633|gb|AAG52269.1|AC019018_6 putative
oxidoreductase; 38288-39393 [Arabidopsis thaliana]
Length = 317
Score = 86.7 bits (213), Expect(3) = 5e-48
Identities = 42/109 (38%), Positives = 65/109 (59%)
Frame = -2
Query: 627 SQTTHMYAMAMAELDQTVMRMLYESYGMDEKKHSVSHSESTRYLLRMLSYRRQQNGEANT 448
S T ++ ++ELD T+ RM+ ES+G+D K+ H ST YLLR++ Y+ E
Sbjct: 128 STTIQSFSKKLSELDITIRRMIMESFGLD--KYIDEHLHSTNYLLRVMKYKGPDTEETKV 185
Query: 447 GFVSHTDKSFMSILHQNHVGGLQLKTMTGQWVGFNPSPTRFVVLSGMGL 301
G +HTDK+ ++IL+QNHV GL+++T W+ P+ F V+ G L
Sbjct: 186 GLNAHTDKNIVTILYQNHVEGLEVQTKDKNWIKVKPTQDSFTVMIGDSL 234
Score = 84.7 bits (208), Expect(3) = 5e-48
Identities = 42/117 (35%), Positives = 69/117 (58%)
Frame = -1
Query: 1051 LPILDFSSDKLVRGTSHWITTRDDVRRAMEGQGWFVAEFSGVSSDLRDNLLAGMKEMYYL 872
LP++DFS+ L G W TR DV++A++ G+F A F + +LR ++ ++E++ L
Sbjct: 12 LPVIDFSNKNLKPGEPEWDLTRADVQKALQDYGYFEASFDRIPFELRKSVFGALEELFDL 71
Query: 871 PDQIKIKNENHKASHGYMSMVVDDYRIHESLGIDYATELQACKDFSKLLWPQGNDPF 701
P Q K++N + K HGY+ ++ES+GID + + F++ LWPQGN F
Sbjct: 72 PLQTKLRNVSKKPFHGYVGQ-YPMVPLYESMGIDDSDIAEKVDAFTEKLWPQGNISF 127
Score = 64.3 bits (155), Expect(3) = 5e-48
Identities = 30/77 (38%), Positives = 47/77 (60%), Gaps = 2/77 (2%)
Frame = -1
Query: 271 SKHHKVVMSADEIRYSLGFFSFHKG--TIRTPEELVDDQHPLRYNPFEHDGLLRFYESYI 98
S +H+V+M+ E RYSLG FS K + +P+ELVD++HP + PF+H + F + Y
Sbjct: 244 SPYHRVMMTGTETRYSLGLFSIPKAGHIVSSPDELVDEEHPRLFKPFDH---VEFLQFYY 300
Query: 97 NSLKKSSEDLLQIYCGV 47
+ S+ L+ YCG+
Sbjct: 301 TEAGQRSQSALKTYCGI 317
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 126
effective length of database: 260,468,745
effective search space used: 75535936050
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)