BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Z48369.x
         (328 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O19058|FUT3_PANTR  Galactoside 3(4)-L-fucosyltransferase ...    30   7.7  

>sp|O19058|FUT3_PANTR Galactoside 3(4)-L-fucosyltransferase (Blood group Lewis
           alpha-4-fucosyltransferase) (Lewis FT)
           (Fucosyltransferase 3) (FUCT-III)
           (Alpha-3/4-
           fucosyltransferase)|gi|2655928|emb|CAA74360.1|
           alpha-3/4-fucosyltransferase [Pan troglodytes]
          Length = 372

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 16/29 (55%), Positives = 16/29 (55%)
 Frame = +3

Query: 30  STRPLFTAEEVKTGVPSGRRRQVTQSTRP 116
           S RP   A E  TG PSG  RQ T  TRP
Sbjct: 44  SPRPGLMAVEPVTGAPSGSSRQDTTPTRP 72



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 84
effective length of database: 316,708,677
effective search space used: 7601008248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)