BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Z47703.x
         (306 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197771.1|  putative protein; protein id: At5g23820.1,...    39   0.022
ref|NP_197772.1|  putative protein; protein id: At5g23830.1,...    32   2.1  
gb|EAA12278.1|  agCP11048 [Anopheles gambiae str. PEST]            31   3.6  
ref|NP_179719.1|  bZIP family transcription factor; protein ...    30   7.9  

>ref|NP_197771.1| putative protein; protein id: At5g23820.1, supported by cDNA:
           gi_15215722, supported by cDNA: gi_20453248 [Arabidopsis
           thaliana]|gi|10176849|dbj|BAB10055.1|
           gene_id:MRO11.14~pir||T00970~similar to unknown protein
           [Arabidopsis thaliana]|gi|15215723|gb|AAK91407.1|
           AT5g23820/MRO11_14 [Arabidopsis
           thaliana]|gi|20453249|gb|AAM19863.1| AT5g23820/MRO11_14
           [Arabidopsis thaliana]
          Length = 164

 Score = 38.5 bits (88), Expect = 0.022
 Identities = 16/18 (88%), Positives = 18/18 (99%)
 Frame = -3

Query: 238 RVCVDFKVPAPAPAFVSI 185
           ++CVDFKVPAPAPAFVSI
Sbjct: 147 KMCVDFKVPAPAPAFVSI 164



>ref|NP_197772.1| putative protein; protein id: At5g23830.1, supported by cDNA:
           13418. [Arabidopsis
           thaliana]|gi|10176850|dbj|BAB10056.1|
           gene_id:MRO11.13~pir||T00970~similar to unknown protein
           [Arabidopsis thaliana]|gi|21537371|gb|AAM61712.1|
           unknown [Arabidopsis
           thaliana]|gi|27754333|gb|AAO22619.1| unknown protein
           [Arabidopsis thaliana]|gi|28393851|gb|AAO42333.1|
           unknown protein [Arabidopsis thaliana]
          Length = 164

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -3

Query: 238 RVCVDFKVPAPAPAFVSI 185
           ++C+DFKVPA A AFVSI
Sbjct: 147 KMCIDFKVPASASAFVSI 164



>gb|EAA12278.1| agCP11048 [Anopheles gambiae str. PEST]
          Length = 2113

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = -2

Query: 287 IHVNL*QKYFGPAEFGTSVCRLQSTCPSS-CICLY-LVKLADEKMFPSLF 144
           +H+NL  +Y+GP EF      LQ    SS  +CL+  ++LA E + P+LF
Sbjct: 478 LHLNLSMEYWGPTEFAHG---LQGHRVSSRSVCLFKFIRLAGELLPPTLF 524



>ref|NP_179719.1| bZIP family transcription factor; protein id: At2g21230.1,
           supported by cDNA: gi_15100050, supported by cDNA:
           gi_15450833, supported by cDNA: gi_20259839 [Arabidopsis
           thaliana]|gi|25412021|pir||G84598 probable bZIP
           transcription factor [imported] - Arabidopsis
           thaliana|gi|4582442|gb|AAD24827.1| putative bZIP
           transcription factor [Arabidopsis
           thaliana]|gi|15100051|gb|AAK84221.1|AF401298_1
           transcription factor bZIP30 [Arabidopsis
           thaliana]|gi|15450834|gb|AAK96688.1| putative bZIP
           transcription factor [Arabidopsis
           thaliana]|gi|20259840|gb|AAM13267.1| putative bZIP
           transcription factor [Arabidopsis thaliana]
          Length = 519

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   QPVNRRKDMLDCLFISLSISVQDFNLFVGQ-HKKGKGKAKLRERLI*SKETWKHLFISQL 179
           Q + ++  + D L   L+  VQ   L +G+ +++  G +    ++  + E ++ L ISQL
Sbjct: 438 QAMEQQAQLRDALSEKLNEEVQRLKLVIGEPNRRQSGSSSSESKMSLNPEMFQQLSISQL 497

Query: 180 D*IETNAGAGAGTLKSTHT 236
              +        T+K+ HT
Sbjct: 498 QHQQMQHSNQCSTMKAKHT 516



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 77
effective length of database: 326,081,999
effective search space used: 7825967976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)