BLASTX 1.4.13-Paracel [2002-12-12]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Z47602.f
(313 letters)
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
1,339,046 sequences; 429,188,541 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566868.2| nitrilase 1; protein id: At3g44310.1, supp... 102 1e-21
ref|NP_683679.1| nitrilase 1; protein id: At3g44310.2, supp... 102 1e-21
gb|AAL16248.1|AF428318_1 AT3g44310/T10D17_100 [Arabidopsis ... 100 6e-21
sp|P32961|NRL1_ARATH Nitrilase 1|gi|99738|pir||S22398 nitri... 100 6e-21
ref|NP_190016.1| nitrilase 2; protein id: At3g44300.1, supp... 96 1e-19
>ref|NP_566868.2| nitrilase 1; protein id: At3g44310.1, supported by cDNA:
gi_14596118, supported by cDNA: gi_16226739 [Arabidopsis
thaliana]|gi|11266289|pir||T49147 nitrilase (EC 3.5.5.1)
1 [imported] - Arabidopsis
thaliana|gi|1389699|gb|AAB05221.1| nitrilase
1|gi|6580143|emb|CAA68935.2| nitrilase 1 [Arabidopsis
thaliana]|gi|7649382|emb|CAB88999.1| nitrilase 1
[Arabidopsis thaliana]|gi|14596119|gb|AAK68787.1|
nitrilase 1 [Arabidopsis
thaliana]|gi|23197664|gb|AAN15359.1| nitrilase 1
[Arabidopsis thaliana]
Length = 346
Score = 102 bits (254), Expect = 1e-21
Identities = 49/54 (90%), Positives = 49/54 (90%)
Frame = -3
Query: 311 VAADIDLGDITRAKLYFDSVGHYSRPDVLHLAVNEHPRKSVTIVTKVEKXEDDS 150
V ADIDLGDI RAKLYFDSVGHYSRPDVLHL VNEHPRKSVT VTKVEK EDDS
Sbjct: 291 VTADIDLGDIARAKLYFDSVGHYSRPDVLHLTVNEHPRKSVTFVTKVEKAEDDS 344
>ref|NP_683679.1| nitrilase 1; protein id: At3g44310.2, supported by cDNA: 113759.
[Arabidopsis thaliana]|gi|21536864|gb|AAM61196.1|
nitrilase 1 [Arabidopsis thaliana]
Length = 224
Score = 102 bits (254), Expect = 1e-21
Identities = 49/54 (90%), Positives = 49/54 (90%)
Frame = -3
Query: 311 VAADIDLGDITRAKLYFDSVGHYSRPDVLHLAVNEHPRKSVTIVTKVEKXEDDS 150
V ADIDLGDI RAKLYFDSVGHYSRPDVLHL VNEHPRKSVT VTKVEK EDDS
Sbjct: 169 VTADIDLGDIARAKLYFDSVGHYSRPDVLHLTVNEHPRKSVTFVTKVEKAEDDS 222
>gb|AAL16248.1|AF428318_1 AT3g44310/T10D17_100 [Arabidopsis thaliana]
Length = 346
Score = 100 bits (248), Expect = 6e-21
Identities = 48/54 (88%), Positives = 49/54 (89%)
Frame = -3
Query: 311 VAADIDLGDITRAKLYFDSVGHYSRPDVLHLAVNEHPRKSVTIVTKVEKXEDDS 150
V ADIDLGDI RAKLYFDSVGHYSRPDVLHL VNE+PRKSVT VTKVEK EDDS
Sbjct: 291 VTADIDLGDIARAKLYFDSVGHYSRPDVLHLTVNEYPRKSVTFVTKVEKAEDDS 344
>sp|P32961|NRL1_ARATH Nitrilase 1|gi|99738|pir||S22398 nitrilase (EC 3.5.5.1) -
Arabidopsis thaliana|gi|16400|emb|CAA45041.1| nitrilase
I [Arabidopsis thaliana]
Length = 346
Score = 100 bits (248), Expect = 6e-21
Identities = 48/54 (88%), Positives = 49/54 (89%)
Frame = -3
Query: 311 VAADIDLGDITRAKLYFDSVGHYSRPDVLHLAVNEHPRKSVTIVTKVEKXEDDS 150
V ADIDLGDI RAKLYFDSVG+YSRPDVLHL VNEHPRKSVT VTKVEK EDDS
Sbjct: 291 VTADIDLGDIARAKLYFDSVGYYSRPDVLHLTVNEHPRKSVTFVTKVEKAEDDS 344
>ref|NP_190016.1| nitrilase 2; protein id: At3g44300.1, supported by cDNA: 40532.,
supported by cDNA: gi_508732 [Arabidopsis
thaliana]|gi|417383|sp|P32962|NRL2_ARATH Nitrilase
2|gi|322548|pir||S31969 nitrilase (EC 3.5.5.1)
[similarity] - Arabidopsis
thaliana|gi|22656|emb|CAA48377.1| nitrilase II
[Arabidopsis thaliana]|gi|508733|gb|AAB60275.1|
nitrilase|gi|7649381|emb|CAB88998.1| nitrilase 2
[Arabidopsis thaliana]|gi|21593607|gb|AAM65574.1|
nitrilase 2 [Arabidopsis thaliana]
Length = 339
Score = 95.9 bits (237), Expect = 1e-19
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -3
Query: 311 VAADIDLGDITRAKLYFDSVGHYSRPDVLHLAVNEHPRKSVTIVTKVEKXEDDS 150
+ AD+DLGD+ RAKLYFDSVGHYSRPDVLHL VNEHP+K VT ++KVEK EDDS
Sbjct: 284 ITADLDLGDVARAKLYFDSVGHYSRPDVLHLTVNEHPKKPVTFISKVEKAEDDS 337
Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
Posted date: Feb 17, 2003 10:02 AM
Number of letters in database: 429,188,541
Number of sequences in database: 1,339,046
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 79
effective length of database: 323,403,907
effective search space used: 7761693768
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)