BLASTX 1.4.13-Paracel [2002-12-12]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Z46681.r
         (354 letters)

Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr 
           1,339,046 sequences; 429,188,541 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ZP_00096023.1|  hypothetical protein [Novosphingobium aro...    34   0.39 
gb|AAF13348.1|AF121334_1  TIP120 homolog [Eufolliculina uhligi]    31   3.3  
ref|NP_778156.1|  brain-specific angiogenesis inhibitor 1 [M...    31   4.3  
ref|XP_149252.1|  RIKEN cDNA 2310033K02 [Mus musculus]             30   5.7  
ref|NP_418821.1|  conserved hypothetical protein [Caulobacte...    30   7.4  

>gb|ZP_00096023.1| hypothetical protein [Novosphingobium aromaticivorans]
          Length = 299

 Score = 34.3 bits (77), Expect = 0.39
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = -1

Query: 75 VHSIAHPAFLMRLHLHLLSDSTGET 1
          V ++   A + RLHLHLLSDSTGET
Sbjct: 11 VPALHESARMQRLHLHLLSDSTGET 35



>gb|AAF13348.1|AF121334_1 TIP120 homolog [Eufolliculina uhligi]
          Length = 884

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 16/44 (36%), Positives = 26/44 (58%)
 Frame = -2

Query: 185 LAESSVVRTHVDKRPVIHQRDDALLDREVALALLPMLSTASPTR 54
           L + S++R  VD  P +HQ DD L+ R+ A +L+  + T  P +
Sbjct: 716 LVDQSLIRK-VDLGPFVHQIDDGLVLRKAAFSLIETILTQLPDK 758



>ref|NP_778156.1| brain-specific angiogenesis inhibitor 1 [Mus
           musculus]|gi|27362913|gb|AAN86966.1| brain-specific
           angiogenesis inhibitor 1 [Mus musculus]
          Length = 1582

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 53  AGWAMLWTTWGEALAQLRG-PAKRHPFGG*PAAYPHACAQPTIRLTGCGLWGQIE 214
           AG   LW+ WGE  A LRG PA  +P              PT+ + G G  G +E
Sbjct: 261 AGGLKLWSLWGECTAGLRGRPANSNP-----------TCLPTLGVEGGGCKGVLE 304



>ref|XP_149252.1| RIKEN cDNA 2310033K02 [Mus musculus]
          Length = 147

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +2

Query: 59  WAMLWTTWGEALAQLRGPAKRHPFGG*PAAYP----HACAQPTIRLTGCG 196
           WA     W  A AQ R P K  P G  PAA P      CA  T RL G G
Sbjct: 2   WASCPCLWVSAPAQKRRPGKGLPSG--PAARPGSPSQGCACRTARLEGLG 49



>ref|NP_418821.1| conserved hypothetical protein [Caulobacter crescentus
          CB15]|gi|25302286|pir||A87249 conserved hypothetical
          protein CC0001 [imported] - Caulobacter
          crescentus|gi|13421087|gb|AAK21989.1| conserved
          hypothetical protein [Caulobacter crescentus CB15]
          Length = 315

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 57 PAFLMRLHLHLLSDSTGET 1
          P F    H+HL+SDSTGET
Sbjct: 38 PRFATYFHIHLVSDSTGET 56



  Database: BlastDB/NCBI/blast/db/2003_02_17_02_00_1/nr
    Posted date:  Feb 17, 2003 10:02 AM
  Number of letters in database: 429,188,541
  Number of sequences in database:  1,339,046
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 429,188,541
effective HSP length: 93
effective length of database: 304,657,263
effective search space used: 7311774312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)